DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rcc1 and Eea1

DIOPT Version :10

Sequence 1:NP_523943.1 Gene:Rcc1 / 38669 FlyBaseID:FBgn0002638 Length:547 Species:Drosophila melanogaster
Sequence 2:XP_006513585.1 Gene:Eea1 / 216238 MGIID:2442192 Length:1458 Species:Mus musculus


Alignment Length:316 Identity:67/316 - (21%)
Similarity:126/316 - (39%) Gaps:72/316 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 ESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQHHTVILTTDLKCSVVGRPE 321
            :.|.|:.....|.| .:|:.|.:.:|..::..|.:|::...|......|  ||...:.:||.:.|
Mouse   801 QQQRQLSTDLELRN-AELSRELQEQEEVVSCTKLDLQNKSEILENIKQT--LTKKEEENVVLKQE 862

  Fly   322 YGRLG---------LGD-VKDVVEKPTIVKKLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQ 376
            :.:|.         ||| ::..|.:.|.||...:.:::    |:.    |...||    |.|::.
Mouse   863 FEKLSQDSKTQHKELGDRMQAAVTELTAVKAQKDALLA----ELS----TTKEKL----SKVSDS 915

  Fly   377 LGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENVPVKVSGS-------- 433
            |.....:.|.|       |.:||..:|.         |.||.| :.|..:.|:...:        
Mouse   916 LKNSKSEFEKE-------NQKGKAAVLD---------LEKACK-ELKHQLQVQAESALKEQEDLK 963

  Fly   434 SSISKKDKTPPQDNVD--------KEAENVDKQEQKENLPAKASTSSKKNKTPPQDNADKEAENV 490
            .|:.|:.:|..|..::        .:|:|..||::|:....:.:.:..|          :.||..
Mouse   964 KSLEKEKETSQQLKIELNSVKGEVSQAQNTLKQKEKDEQQLQGTINQLK----------QSAEQK 1018

  Fly   491 DKQEQKENLPAKASTSSKKIKTPPQDDAAEEVEEESAQEPTPKKAKKPAAKRGGKK 546
            .||.:......|.:.|.|.:    .::..::...::|||...:|.|..|.:...:|
Mouse  1019 KKQIEALQGEVKNAVSQKTV----LENKLQQQSSQAAQELAAEKGKLSALQSNYEK 1070

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rcc1NP_523943.1 ATS1 42..389 CDD:444065 33/141 (23%)
Borrelia_P83 <419..>508 CDD:114011 19/104 (18%)
Eea1XP_006513585.1 SMC_prok_B 126..784 CDD:274008
SMC_prok_B 547..1381 CDD:274008 67/316 (21%)
FYVE_EEA1 1394..1456 CDD:277269
Blue background indicates that the domain is not in the aligned region.

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