Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006532246.1 | Gene: | Nek8 / 140859 | MGIID: | 1890646 | Length: | 702 | Species: | Mus musculus |
Alignment Length: | 372 | Identity: | 90/372 - (24%) |
---|---|---|---|
Similarity: | 157/372 - (42%) | Gaps: | 65/372 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 DAVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLIDLPGKALC--------- 130
Fly 131 -----ISAGDSHSACLLEDGRVFAWGSFRD---SHGNMGLTIDGNKRTPIDLMEGTVCCSIASGA 187
Fly 188 DHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLIITRAKPFEAIWATNYC 252
Fly 253 TFMRESQTQVIWATGLNNFKQLA--HETKGKE----------FALTPIKT---ELKDIRHIAGGQ 302
Fly 303 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKL 366
Fly 367 YSWGSGVNNQLGVGDGD---------DELEPIVVVSKNTQGKHMLLA 404 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 3/13 (23%) |
RCC1 | 92..141 | CDD:278826 | 11/62 (18%) | ||
RCC1_2 | 131..158 | CDD:290274 | 8/29 (28%) | ||
RCC1 | 144..193 | CDD:278826 | 13/51 (25%) | ||
RCC1_2 | 182..209 | CDD:290274 | 9/26 (35%) | ||
RCC1 | 363..414 | CDD:278826 | 18/51 (35%) | ||
Nek8 | XP_006532246.1 | STKc_Nek8 | 3..258 | CDD:270859 | |
ATS1 | 318..663 | CDD:227511 | 82/346 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |