DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rcc1 and LOC100536575

DIOPT Version :9

Sequence 1:	NP_523943.1	Gene:	Rcc1 / 38669	FlyBaseID:	FBgn0002638	Length:	547	Species:	Drosophila melanogaster
Sequence 2:	XP_009295984.1	Gene:	LOC100536575 / 100536575	-ID:	-	Length:	409	Species:	Danio rerio

Alignment Length:	177	Identity:	51/177 - (28%)
Similarity:	79/177 - (44%)	Gaps:	39/177 - (22%)

- Green bases have known domain annotations that are detailed below.

  Fly    76 AVDISAGGMHNLVLTKSGDIYSFGCNDEGALGRD--TSEDGSESKPDLIDLPGKALCISAGDSHS 138
            ||.:..|..|.|:||..|.:||:|....|.||..  ||.:..::...|..:|.||  ::||:.||
Zfish   188 AVSLVLGSEHALLLTADGTLYSWGSGSHGQLGHGVLTSLEDPQAVEALWGVPIKA--VAAGNWHS 250

  Fly   139 ACLLEDGRVFAWGSFRDSHGNMGL----------------------TIDGNKRTP---------- 171
            |.:...|.::.|| :.:| |.:||                      ..||..||.
Zfish   251 AAVSSGGDLYMWG-WNES-GQLGLPSRGLEEEKRRGNGSGNDDQPINTDGKSRTDVFISIQAFPA 313

  Fly   172 -IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERS 217
             :|:...:....|:.|:.|...:|:||.::|.|..:.||||..:|.|
Zfish   314 LVDIANMSEISRISCGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHS 360

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rcc1	NP_523943.1	RCC1	42..89	CDD:278826	5/12 (42%)
		RCC1	92..141	CDD:278826	18/50 (36%)
		RCC1_2	131..158	CDD:290274	9/26 (35%)
		RCC1	144..193	CDD:278826	15/81 (19%)
		RCC1_2	182..209	CDD:290274	8/26 (31%)
		RCC1	363..414	CDD:278826
LOC100536575	XP_009295984.1	RCC1_2	189..217	CDD:290274	10/27 (37%)
		RCC1	204..253	CDD:278826	18/50 (36%)
		RCC1_2	240..269	CDD:290274	11/32 (34%)
		RCC1	257..336	CDD:278826	15/80 (19%)
		RCC1_2	323..352	CDD:290274	8/28 (29%)
		RCC1	340..389	CDD:278826	9/21 (43%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5184
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1062377at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910