Sequence 1: | NP_523943.1 | Gene: | Rcc1 / 38669 | FlyBaseID: | FBgn0002638 | Length: | 547 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031761501.1 | Gene: | rcc2 / 100494942 | XenbaseID: | XB-GENE-996297 | Length: | 513 | Species: | Xenopus tropicalis |
Alignment Length: | 498 | Identity: | 117/498 - (23%) |
---|---|---|---|
Similarity: | 188/498 - (37%) | Gaps: | 132/498 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 NNNNAGEAEQQPPKAKRARIAFHLELPKRRTVL------GNVLVCG--NGD-VGQ---------- 54
Fly 55 LGLGEDILERKRLSPVAGIPDAVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSES 117
Fly 118 K---PDLID-LPGKALCISA-GDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPID---- 173
Fly 174 -LMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRRGKRDLLRPTQLII 237
Fly 238 TRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGGQ 302
Fly 303 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLT---EKIVSVGCGEVCSYAVTIDG 364
Fly 365 KLYSWGS--------------------GVNN--------------------------QLGVGDGD 383
Fly 384 DELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKADKQDQKENV 426 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rcc1 | NP_523943.1 | RCC1 | 42..89 | CDD:278826 | 14/61 (23%) |
RCC1 | 92..141 | CDD:278826 | 17/53 (32%) | ||
RCC1_2 | 131..158 | CDD:290274 | 9/27 (33%) | ||
RCC1 | 144..193 | CDD:278826 | 15/53 (28%) | ||
RCC1_2 | 182..209 | CDD:290274 | 8/26 (31%) | ||
RCC1 | 363..414 | CDD:278826 | 14/96 (15%) | ||
rcc2 | XP_031761501.1 | ATS1 | 122..472 | CDD:227511 | 94/400 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1062377at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |