DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33523 and VAPB

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_004729.1 Gene:VAPB / 9217 HGNCID:12649 Length:243 Species:Homo sapiens


Alignment Length:179 Identity:43/179 - (24%)
Similarity:76/179 - (42%) Gaps:37/179 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 EGMLHINPKDFVNFNSKNAEATMTIKSIATSA---VTYKIQTTSPEKFRVRPRCGIIQPNQEATI 352
            |.:|.:.|:..:.|.....:...|...:....   |.:|::||:|.::.|||..|||.......:
Human     5 EQVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGASINV 69

  Fly   353 NIWLKS-EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFD---EN 413
            ::.|:. ::..::.||.||:|.:|.||   ...:|:..:|:...|  .|:...:|.|.|:   ||
Human    70 SVMLQPFDYDPNEKSKHKFMVQSMFAP---TDTSDMEAVWKEAKP--EDLMDSKLRCVFELPAEN 129

  Fly   414 ---------------KSKAQLDCASKSSKASVD----------CSKKSG 437
                           .||.:....|||..:|:|          |.:..|
Human   130 DKPHDVEINKIISTTASKTETPIVSKSLSSSLDDTEVKKVMEECKRLQG 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890
Motile_Sperm 293..396 CDD:459882 26/106 (25%)
VAPBNP_004729.1 Motile_Sperm 8..111 CDD:459882 26/105 (25%)
Blue background indicates that the domain is not in the aligned region.

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