DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33523 and PATL1

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_177360.1 Gene:PATL1 / 843546 AraportID:AT1G72150 Length:573 Species:Arabidopsis thaliana


Alignment Length:368 Identity:68/368 - (18%)
Similarity:118/368 - (32%) Gaps:129/368 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GVKVKETTPQQIEELRDRFNRKYASSPP----------------AAPFHPTDIDRIRNDHLW--- 47
            |.|..|...:.|..:          |||                |.|..|.::.      :|   
plant   200 GTKTVEAIEESIVSV----------SPPESAVAPVVVETVAVAEAEPVEPEEVS------IWGVP 248

  Fly    48 ----------LQRFLEMYDLDMETSFNSLWETCILRQSTGANDIDE-SELNQEYLK-EGSVFVHN 100
                      |.:||...|..::.:...|..|...|:.   |.||| .|..:|..: |..||.|.
plant   249 LLQDERSDVILTKFLRARDFKVKEALTMLKNTVQWRKE---NKIDELVESGEEVSEFEKMVFAHG 310

  Fly   101 TDVDGKPLLV-----FRVK-MHSKSKNLDELIRIVVYWVERTQREQHLTQLTIFFDMSGTS---- 155
            .|.:|..::.     |:.| :.|..:.|::.:.    |  |.|.::...:...|.:....|    
plant   311 VDKEGHVVIYSSYGEFQNKELFSDKEKLNKFLS----W--RIQLQEKCVRAIDFSNPEAKSSFVF 369

  Fly   156 ---------LASMDL-EFVKRIVETFKQFYPNSLNYILVYELGWVLNAAFKVIKAVL-------- 202
                     |....| :|::|.|:.|:..||......|...:.|.....:|...:::        
plant   370 VSDFRNAPGLGKRALWQFIRRAVKQFEDNYPEFAAKELFINVPWWYIPYYKTFGSIITSPRTRSK 434

  Fly   203 -----PPKAVE-ILKMISKKDIN-QY--INKDN---------------------------CLAIW 231
                 |.|:.: |.|.|:.:.:. :|  ::||.                           |...|
plant   435 MVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTPLTEETITEAIVKPAANYTIELPASEACTLSW 499

  Fly   232 -----GGEDNYEFSFVPEAK----KVISKPVAANAGDDDQFAD 265
                 |.:.:|...|.|..:    .::||.....:.|:....|
plant   500 ELRVLGADVSYGAQFEPTTEGSYAVIVSKTRKIGSTDEPVITD 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890 35/207 (17%)
Motile_Sperm 293..396 CDD:459882
PATL1NP_177360.1 CRAL_TRIO_N <247..280 CDD:215024 5/32 (16%)
SEC14 310..465 CDD:214706 28/160 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.