DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33523 and SFH12

DIOPT Version :9

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_568006.1 Gene:SFH12 / 829801 AraportID:AT4G36490 Length:543 Species:Arabidopsis thaliana


Alignment Length:544 Identity:102/544 - (18%)
Similarity:196/544 - (36%) Gaps:159/544 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGVKVKETTPQQIEELR--DRFNRKYASSPPAAPFHPTDIDRI----RNDHLWLQRFLEMYDLDM 59
            |.|::.|.. ...|||:  |.|.:...            :|.:    .:|:..:.|||:....|:
plant    39 MSVEIIEDV-HDAEELKAVDAFRQSLI------------LDELLPEKHDDYHMMLRFLKARKFDL 90

  Fly    60 ETSFNSLW-ETCILRQSTGAN----DIDESELNQ--EYLKEGSVFVHNTDVDGKPLLVFRVKMHS 117
            |.: ..:| |....|:..||:    :.|..|:::  :|..:|.   |..|.:|:|:.:.|:.:..
plant    91 EKT-KQMWTEMLRWRKEFGADTVMEEFDFKEIDEVLKYYPQGH---HGVDKEGRPVYIERLGLVD 151

  Fly   118 KSK-----NLDELIRIVVYWVERT----------QREQHLTQLTIFFDMSGTSL-----ASMDLE 162
            .:|     .:|..:...|...|||          ..::|:.|.|...|:.|..|     |:.|| 
plant   152 STKLMQVTTMDRYVNYHVMEFERTFNVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDL- 215

  Fly   163 FVKRIVETFKQFYPNSLNYILVYELGWVLNAAFKVIKAVLPPKAV------------EILKMISK 215
             :.|:.:.....||.:||.:.:...|......:..:|:.|.||..            ::|::|.:
plant   216 -ITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDE 279

  Fly   216 KDINQYIN-----KDN--CL--------------AIWGGE---------DNYEFSFVPEAKKVIS 250
            .::.:::.     .||  |:              .:..|:         :|.....:||.....:
plant   280 SELPEFLGGSCTCADNGGCMRSDKGPWKNPEIMKRVHNGDHKCSKGSQAENSGEKTIPEEDDSTT 344

  Fly   251 KPVAANAGDDDQFADKKVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKNAEATMT- 314
            :|.:     :::.|.|:|..|   |......|:.:.|..|     ::.|:..........||.. 
plant   345 EPAS-----EEEKASKEVEIV---PAAHPAWNMPEAHKFS-----LSKKEVYAIQEACNNATTEG 396

  Fly   315 --------IKSIATSAVT-YKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKSEHKLSDDSKDKF 370
                    :.::....|| .|:....|.|.            .|:|:   ..|.....|.|.:|.
plant   397 GRSPIFTGVMALVMGVVTMIKVTKNVPRKL------------TESTL---YSSPVYCDDASMNKS 446

  Fly   371 LVMA--MVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFDENKSKAQLDCASKSSKASV--- 430
            .:.:  |..|.  ..|.|...:.:    ..|::||...|.                |::.:|   
plant   447 AMQSEKMTVPA--ISGEDFMAIMK----RMAELEQKVTVL----------------SAQPTVMPP 489

  Fly   431 DCSKKSGAGVDPATAMERQLAFTQ 454
            |..:...|.:..:..:|::||.|:
plant   490 DKEEMLNAAISRSNVLEQELAATK 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..234 CDD:279044 36/192 (19%)
Motile_Sperm 293..396 CDD:279029 18/114 (16%)
SFH12NP_568006.1 CRAL_TRIO_N 54..100 CDD:215024 10/58 (17%)
SEC14 120..290 CDD:214706 35/174 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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