DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33523 and vapa

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001011333.1 Gene:vapa / 496796 XenbaseID:XB-GENE-990155 Length:227 Species:Xenopus tropicalis


Alignment Length:125 Identity:33/125 - (26%)
Similarity:65/125 - (52%) Gaps:9/125 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 EGMLHINPKDFVNFNSKNAEATMT---IKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATI 352
            |.:|.::|.:.:.|.....:...|   :::.:...|.:|::||:|.::.|||..|.|.|....|:
 Frog     5 EQILILDPPNELKFKGPFTDVVTTNLKLRNPSDKKVCFKVKTTAPRRYCVRPNSGTIDPGSTVTV 69

  Fly   353 NIWLKS-EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFD 411
            ::.|:. ::..::.||.||:|..:.||...   :|:..:|:...|.  |:...:|.|.||
 Frog    70 SVMLQPFDYDPNEKSKHKFMVQTIFAPPTI---SDMEAVWKEAKPD--DLMDSKLRCVFD 124

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890
Motile_Sperm 293..396 CDD:459882 26/106 (25%)
vapaNP_001011333.1 Motile_Sperm 7..111 CDD:459882 26/106 (25%)
Blue background indicates that the domain is not in the aligned region.

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