DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33523 and rlbp1b

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_991253.1 Gene:rlbp1b / 402990 ZFINID:ZDB-GENE-040426-1870 Length:307 Species:Danio rerio


Alignment Length:245 Identity:45/245 - (18%)
Similarity:87/245 - (35%) Gaps:58/245 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKVK-ETTPQQIEELRDRFNRKYASSPPAAPFHPTDIDRIRNDHLWLQRFLEMYDLDMETSFNSL 66
            :|.| ||..:..:.::|.|..|           |..:         |.||:.....|:..::..:
Zfish    70 IKEKAETGDELAKGVQDTFGEK-----------PDGV---------LVRFIRARKYDVNRAYELM 114

  Fly    67 WETCILRQSTGANDIDESELNQEYLKEGSVFVHNT------------DVDGKPLLVFRVKMHSKS 119
            ......|:       |..||.:....|.   |.:|            |..|:.:|:|.::.....
Zfish   115 KGYVRFRR-------DYPELFENLTPEA---VRSTIEAGYPGILSSRDKYGRVVLLFNIENWDYE 169

  Fly   120 K-NLDELIRIVVYWVERTQREQHLTQLTIF--------FDMSGTS-LASMDLEFVKRIVETFKQF 174
            : ..||::|.....:|:. .|...||:..|        |.|...| :...:|   |::|:..:..
Zfish   170 EITFDEILRAYCVILEKL-LENEETQINGFCIIENFKGFTMQQASGIKPTEL---KKMVDMLQDS 230

  Fly   175 YPNSLNYILVYELGWVLNAAFKVIKAVLPPKAVEILKMISKKDINQYINK 224
            :|.....:......|.....:.|:|.::..|.:|.: .:...|:..|..:
Zfish   231 FPARFKAVHFIHQPWYFTTTYNVVKPLMKSKLLERV-FVHGDDLENYFKE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890 28/153 (18%)
Motile_Sperm 293..396 CDD:459882
rlbp1bNP_991253.1 CRAL_TRIO_N 60..117 CDD:215024 12/66 (18%)
SEC14 141..292 CDD:469559 26/144 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.