DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33523 and Vap33

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_570087.1 Gene:Vap33 / 31349 FlyBaseID:FBgn0029687 Length:269 Species:Drosophila melanogaster


Alignment Length:150 Identity:39/150 - (26%)
Similarity:74/150 - (49%) Gaps:20/150 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 LHINPKD---FVNFNSKNAEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIW 355
            |.|.|:.   ||...::.....||:::.:...:.:||:||:|:::.|||..|.|.|.:...:.|.
  Fly    10 LTIEPEHELRFVGPFTRPVVTIMTLRNNSALPLVFKIKTTAPKRYCVRPNIGKIIPFRSTQVEIC 74

  Fly   356 LKS-EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFDENKSKAQL 419
            |:. .:...:.:|.||:|.:::|| .:...:|:.:||:       |:|..:|:        .|:|
  Fly    75 LQPFVYDQQEKNKHKFMVQSVLAP-MDADLSDLNKLWK-------DLEPEQLM--------DAKL 123

  Fly   420 DCASKSSKASVDCSKKSGAG 439
            .|..:...|..:....||.|
  Fly   124 KCVFEMPTAEANAENTSGGG 143

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890
Motile_Sperm 293..396 CDD:459882 29/105 (28%)
Vap33NP_570087.1 Motile_Sperm 9..115 CDD:459882 30/112 (27%)
Blue background indicates that the domain is not in the aligned region.

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