DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33523 and Vapa

DIOPT Version :9

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:XP_017172989.1 Gene:Vapa / 30960 MGIID:1353561 Length:290 Species:Mus musculus


Alignment Length:348 Identity:70/348 - (20%)
Similarity:135/348 - (38%) Gaps:89/348 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 EGMLHINPKDFVNFNSKNAEATMT---IKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATI 352
            |.:|.::|...:.|.....:...|   :::.:...|.:|::||:|.::.|||..|||.|....|:
Mouse    12 EQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTV 76

  Fly   353 NIWLKS-EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFD---EN 413
            ::.|:. ::..::.||.||:|..:.||...   :|:..:|:...|.  ::...:|.|.|:   ||
Mouse    77 SVMLQPFDYDPNEKSKHKFMVQTIFAPPNI---SDMEAVWKEAKPD--ELMDSKLRCVFEMPNEN 136

  Fly   414 KSKAQLDCASKSSKASVDCSKKSGAGVDPATAM----ERQLAFTQNLQYVTLALLFLLFAGFGFL 474
            ....:......|:.||:  |..|.|...||:..    .|:|                        
Mouse   137 DKLGKTPPGIASTVASL--SSVSSAVATPASYHLKNDPREL------------------------ 175

  Fly   475 MYQQLGQHAATCPKATAYSCAKRKXYLLSPCNLTRQELDIAARDSHNNNEDDC-----DCPELEN 534
              :::.|:.....||.             |.|.::|:..:....|.:.|:.:.     :|..|:.
Mouse   176 --KEVKQNDMEPSKAV-------------PLNASKQDGPLPKPHSVSLNDTETRKLMEECKRLQG 225

  Fly   535 CACAVDLMNLGLDCADTMDQYDGECLEALIQAHLQLCLSCQGTGDWQLGGVAAGGHLLGFIAFAR 599
                 ::|.|..:.....|    |.|.....||..           :.|..:|       ::|..
Mouse   226 -----EMMKLSEENRHLRD----EGLRLRKVAHSD-----------KPGSTSA-------VSFRD 263

  Fly   600 KMVRVVLSLSLLCGILFVSFYLG 622
            .:...:.||.::...:|:.|:||
Mouse   264 NVTSPLPSLLVVIAAIFIGFFLG 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..234 CDD:279044
Motile_Sperm 293..396 CDD:279029 27/106 (25%)
VapaXP_017172989.1 Motile_Sperm 14..118 CDD:334183 27/106 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5066
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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