DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33523 and pdr16

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_588127.1 Gene:pdr16 / 2539120 PomBaseID:SPCC23B6.04C Length:1008 Species:Schizosaccharomyces pombe


Alignment Length:475 Identity:94/475 - (19%)
Similarity:164/475 - (34%) Gaps:128/475 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 PAAPFHPTDIDRIRNDHLWLQ-----RFLEMYDLDMETSFNSLWETCILRQSTGANDIDESELNQ 88
            |.|.......|.|..:.|||.     |:|......:..:...:.:|.:.|:..|.|::|..|: |
pombe   614 PVASNSSKKTDLIELERLWLTRECILRYLRATKWHVSNAKKRIVDTLVWRRHFGVNNMDPDEI-Q 677

  Fly    89 EYLKEGSVFVHNTDVDGKP-LLVFRVKMHSKSKNLDELIRIVVYWVE-----RTQREQHLTQLTI 147
            |....|...:...|.||:| |.::..:.::|:..|.  ||.:|:.:|     .....:.|..|..
pombe   678 EENATGKQVLLGYDKDGRPCLYLYPARQNTKTSPLQ--IRHLVFSLECAIDLMPPGVETLALLIN 740

  Fly   148 FFDMSGTSLASMDLEFVKRIVETFKQFYPNSLNYILVYELGWVLNAAFKVIKAVLPPKAVEILKM 212
            |...|..|..|:...  |.::...:..|...|...||..:.|.:...||:|...:.|...|.||.
pombe   741 FKSSSNRSNPSVGQG--KEVLNILQTHYCERLGRALVINIPWAVWGFFKLISPFIDPITREKLKF 803

  Fly   213 ISKKDINQYINKDNCLAIWGGEDNYEF---SFVPE-------------------AKKVISKPVAA 255
              .:.:::|:.||...:.:||..::|:   .:.|:                   ..|:.:.....
pombe   804 --NEPLDRYVPKDQLDSNFGGSLHFEYHHEKYWPQLVELCKSRRLGILEKWRKMGSKIGTSEWDL 866

  Fly   256 NAGDD-----DQFADKKVTFVDSAPMVLKETNINKMHTPSEGMLHINPKDFVNFNSKNAEATMTI 315
            ..|::     .|:....:|...|:|.|....|.::           .||...|            
pombe   867 KGGEEYVELMQQYVRPSLTNRSSSPTVTPTVNTDR-----------QPKTLTN------------ 908

  Fly   316 KSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEATINIWLKSEHKLSDDSKDKFLVMAMVAPGG 380
                      .....||:|.||.        |.:..:              ||:           
pombe   909 ----------SADELSPQKRRVE--------NPKPVV--------------KDE----------- 930

  Fly   381 ECGGADVTELWRSKSPTSADVEQHRLVCRFDENKSKAQLDCASKSSKASVDCSKKSGAGVD--PA 443
              |...:.|          |.|...:|.:.:::...||...|.....|..|...|||:||.  ||
pombe   931 --GPVSIVE----------DEESTPVVTKKEDSIPVAQSTKADAGLDAENDLLPKSGSGVSETPA 983

  Fly   444 TAMERQL---AFTQNLQYVT 460
            .:..|.:   :|:..:.::|
pombe   984 FSHARDVSTASFSDAVSFIT 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890 34/144 (24%)
Motile_Sperm 293..396 CDD:459882 13/102 (13%)
pdr16NP_588127.1 PTZ00449 <344..>578 CDD:185628
CRAL_TRIO_N 599..658 CDD:461043 9/43 (21%)
CRAL_TRIO 682..822 CDD:459890 34/145 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.