DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33523 and vpr-1

DIOPT Version :10

Sequence 1:NP_001261457.1 Gene:CG33523 / 38668 FlyBaseID:FBgn0053523 Length:654 Species:Drosophila melanogaster
Sequence 2:NP_001370533.1 Gene:vpr-1 / 172259 WormBaseID:WBGene00018008 Length:245 Species:Caenorhabditis elegans


Alignment Length:277 Identity:58/277 - (20%)
Similarity:109/277 - (39%) Gaps:66/277 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   288 TPSEGMLHINP-KDFVNFNSKNAEATMTIKSIATSAVTYKIQTTSPEKFRVRPRCGIIQPNQEAT 351
            ||:..::...| .|.|.       :.||:|:.:|:.|.:|::||:|:::.|||..|:::......
 Worm    11 TPNRELVFTGPFSDVVT-------SHMTLKNTSTNPVCFKVKTTAPKQYCVRPNSGLLKSGDSKQ 68

  Fly   352 INIWLKS-EHKLSDDSKDKFLVMAMVAPGGECGGADVTELWRSKSPTSADVEQHRLVCRFDENKS 415
            |.:.|:. |...||..:.||:|.:.|||..:.  .|:..:|:...|  |::...:|:..|.:.: 
 Worm    69 ITVMLQPLEGIPSDAGRHKFMVQSCVAPSEDL--PDLESVWKIIDP--AELTYSKLMVTFVDKR- 128

  Fly   416 KAQLDCASKSSKASVDCSKKSGAGVDPATAMERQLAFTQNLQYVTLALLFLLFAGFGFLMYQQLG 480
                                     |||:..:.:....:|..         .||..|  ..|:||
 Worm   129 -------------------------DPASGDDTKTFAVRNED---------SFASSG--QAQELG 157

  Fly   481 QHAATCP---------KATAYSCAKRKXYLLSPCNLTRQELDIAARDSHNNNEDDCD-------C 529
            ...:..|         :.:..|....| .|....:...||:::..:.:....:...|       .
 Worm   158 SSYSGTPSHDGTVNSLRKSLKSTVDEKEELQKKVHGLEQEIEVMLKKNRKLQQSHSDGALVDGAY 222

  Fly   530 PELENCACAVDLMNLGL 546
            |.|:....||..:.:||
 Worm   223 PTLQIFLIAVAALLIGL 239

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33523NP_001261457.1 CRAL_TRIO 94..233 CDD:459890
Motile_Sperm 293..396 CDD:459882 29/104 (28%)
vpr-1NP_001370533.1 Motile_Sperm 7..112 CDD:459882 31/109 (28%)
Blue background indicates that the domain is not in the aligned region.

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