DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32407 and PATL2

DIOPT Version :9

Sequence 1:NP_001261456.1 Gene:CG32407 / 38667 FlyBaseID:FBgn0052407 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_173669.1 Gene:PATL2 / 838859 AraportID:AT1G22530 Length:683 Species:Arabidopsis thaliana


Alignment Length:312 Identity:64/312 - (20%)
Similarity:117/312 - (37%) Gaps:80/312 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SDQDPTPEQISQVKTSILQRLEKEPPA--EPFHPN--DLKRITD--SDLWITKLLQVYDFDVEKC 61
            :||:...:.:..|:.||:.....|..|  ||...:  .:..:.|  ||:.:.|.|:..||.|::.
plant   318 ADQEEETKTVEAVEESIVSITLPETAAYVEPEEVSIWGIPLLEDERSDVILLKFLRARDFKVKEA 382

  Fly    62 ITRLWDNLAWRKSFGVYDITEANL-NQEFLNDGSIYVHNKDRDGKPLLILTIKKHSKSRNQE--- 122
            .|.|.:.:.|||...:.|:...:| ..||  :..::.|..|:.|.   ::....:.:.:|:|   
plant   383 FTMLKNTVQWRKENKIDDLVSEDLEGSEF--EKLVFTHGVDKQGH---VVIYSSYGEFQNKEIFS 442

  Fly   123 DLLRILVFWIERLQ--------------RDSNLDKITIFMDMTGAGLSNLDMGFIKSIIGVFETK 173
            |..::..|...|:|              ..|:...::.|.:..|.|...| ..|||..:..||..
plant   443 DKEKLSKFLKWRIQFQEKCVRSLDFSPEAKSSFVFVSDFRNAPGLGQRAL-WQFIKRAVKQFEDN 506

  Fly   174 YP--------------YVPNYILVHDL--------PFLLDAAFKLVKT---FLPPEAL------- 206
            ||              |:|.|.....:        ..:|....|..:|   ::.||.:       
plant   507 YPEFVAKELFINVPWWYIPYYKTFGSIITSPRTRSKMVLSGPSKSAETIFKYVAPEVVPVKYGGL 571

  Fly   207 --------------KILKVTTKKDIDQYVDKDNC----LKIWGGNDDYVYKF 240
                          .::|.|:|..||....:.:.    |::.|.:..|..:|
plant   572 SKDSPFTVEDGVTEAVVKSTSKYTIDLPATEGSTLSWELRVLGADVSYGAQF 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32407NP_001261456.1 CRAL_TRIO 92..233 CDD:279044 36/207 (17%)
PATL2NP_173669.1 CRAL_TRIO_N <357..389 CDD:215024 10/31 (32%)
SEC14 410..571 CDD:238099 31/166 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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