DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG32407 and rlbp1a

DIOPT Version :9

Sequence 1:NP_001261456.1 Gene:CG32407 / 38667 FlyBaseID:FBgn0052407 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:262 Identity:41/262 - (15%)
Similarity:103/262 - (39%) Gaps:65/262 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 QISQVKTSILQRLEKEPPAEPFHPNDLKRITDSDLWITKLLQVYDFDVEKCITRLWDNLAWRKSF 75
            |..:|..::..:..|||                |..:.:.::...|||.:....:...:.:|:.:
Zfish    75 QGDEVAKTVQDKFGKEP----------------DSLLLRFIRARKFDVARAHELMKGYVRFRRDY 123

  Fly    76 GVYDITEANLNQEFLNDGSI------YVHNKDRDGKPLLILTIKKHS-KSRNQEDLLRILVFWIE 133
            .  ::.| ||..|.:. .:|      .:..:|::|:.:|:..|.... :....::.||.....:|
Zfish   124 P--ELFE-NLTPEAVR-STIEAGYPRILSTRDKNGRVVLLFNIDNWDLEEVTFDETLRAYCVILE 184

  Fly   134 RL--QRDSNLDKITIFMDMTG------AGLSNLDMGFIKSIIGVFETKYPYVPNYILVHDL--PF 188
            :|  ..::.::...:..:..|      :|:.:.:   :|.::.:.:..:|  ..:..||.:  |:
Zfish   185 KLLENEETQINGFVLIENFKGFTMQHASGIKHTE---LKKMVDMLQDSFP--ARFKAVHVIHQPW 244

  Fly   189 LLDAAFKLVKTFLPPEALKILKVTTKKD-IDQYV--------------------DKDNCLKIWGG 232
            .....:.:||.|:..:.|:  :|....| :|.|:                    .::..:|::|.
Zfish   245 YFTTTYNVVKPFMKSKLLE--RVFVHGDELDGYLRDFGAEILPPDFDGTGPACDGRETAIKLFGS 307

  Fly   233 ND 234
            .|
Zfish   308 ED 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32407NP_001261456.1 CRAL_TRIO 92..233 CDD:279044 26/178 (15%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 9/56 (16%)
CRAL_TRIO 142..291 CDD:279044 23/155 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1133487at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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