DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32407 and ttpa

DIOPT Version :9

Sequence 1:NP_001261456.1 Gene:CG32407 / 38667 FlyBaseID:FBgn0052407 Length:241 Species:Drosophila melanogaster
Sequence 2:NP_956025.2 Gene:ttpa / 325906 ZFINID:ZDB-GENE-030131-4631 Length:285 Species:Danio rerio


Alignment Length:279 Identity:52/279 - (18%)
Similarity:108/279 - (38%) Gaps:45/279 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSDQDPTPEQISQVKTS------ILQRLEKEPPAEPFHPNDLKRITDSDL---WITKLLQVYDF 56
            |.|::....|:::.:...      .|..|:::..||       .||.|.||   ::.:.||..||
Zfish     1 MKSEEVDETEELNNLPVDSSRIAPYLSELKEKAEAE-------LRIRDLDLSKTFLIRFLQARDF 58

  Fly    57 DVEKCITRLWDNLAWRKSFG--VYDITEANLNQEFLNDGSIYVHNKDRDGKPLLILTIKK-HSKS 118
            ||...:..|.:...||:...  ..|:..:::.....|:....:.::|..|..:||..|.| :.|.
Zfish    59 DVALALKLLINYHKWRQECPEITADLRPSSVIGLLQNNYHGVLRSRDDAGSRVLIYRIGKWNPKE 123

  Fly   119 RNQEDLLRILVFWIERLQRD-----SNLDKITIFMDMTGAGLSNLDMGFIKSIIGVFETKYPYVP 178
            ....::.|:.:...|.:.::     :.|..|....|...|....::....|.|..|....:|...
Zfish   124 FTAYEVFRVSLITSELIVQEWETQRNGLKAIFDLQDWCFAHALQINPSLAKKISSVLTDSFPLKV 188

  Fly   179 NYILVHDLPFLLDAAFKLVKTFLPPEALKILKV---TTKKDIDQYVDKDNCLKIWGG-------- 232
            ..|.:.:.|......|.:::.|||.:..:.:.:   :..:.:..|..|.....::||        
Zfish   189 RGIHLINEPIFFRPVFAMIRPFLPDKIKQRIHMHGCSYARSLCNYFPKAVLPPVYGGTGPSVDEV 253

  Fly   233 ----------NDDYVYKFA 241
                      ::||:::.:
Zfish   254 CQEWTEYIMQSEDYLHRLS 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32407NP_001261456.1 CRAL_TRIO 92..233 CDD:279044 27/167 (16%)
ttpaNP_956025.2 CRAL_TRIO_N 26..70 CDD:215024 16/50 (32%)
CRAL_TRIO 97..246 CDD:279044 26/148 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.