DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG32407 and clvs1

DIOPT Version :9

Sequence 1:	NP_001261456.1	Gene:	CG32407 / 38667	FlyBaseID:	FBgn0052407	Length:	241	Species:	Drosophila melanogaster
Sequence 2:	XP_012819596.1	Gene:	clvs1 / 100037913	XenbaseID:	XB-GENE-5740434	Length:	332	Species:	Xenopus tropicalis

Alignment Length:	247	Identity:	49/247 - (19%)
Similarity:	96/247 - (38%)	Gaps:	37/247 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly     8 TPEQISQVKTSILQRLEKEPPAEPFHPNDLKRITD-------------SDLWITKLLQVYDFDVE 59
            :||.|.:      .|||.....:..| .|::::.|             .|.:|.:.|:...|:..
Frog     9 SPETIEK------SRLELNENPDTLH-QDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFNQM 66

  Fly    60 KCITRLWDNLAWRK----SFGVYDITEANLNQEFLNDGSIYVHNKDRDGKPLLILTIKKHSKSRN 120
            :....|.....:|:    .|......:..:.:..::.....:.|:|..|:.:|:|......:|||
Frog    67 EAFRLLAQYFQYRQLNLDMFKNLKADDPGIKRALMDGFPGVLENRDHYGRKILLLFAANWDQSRN 131

  Fly   121 Q-EDLLRILVFWIERLQRDSNL--DKITIFMDMTGAGL---SNLDMGFIKSIIGVFETKYPYVPN 179
            . .|:||.::..:|.|..|..|  :...:.:|.:....   |.|....::..|...:..:|  ..
Frog   132 SFVDILRAILLSLEVLIEDQELQINGFILIIDWSNFSFKQASKLTPSILRLAIEGLQDSFP--AR 194

  Fly   180 YILVH--DLPFLLDAAFKLVKTFLPPEALK--ILKVTTKKDIDQYVDKDNCL 227
            :..||  :.|:.:.|.:.::|.||..:..|  .|.......:.|.:..| ||
Frog   195 FGGVHFVNQPWYIHALYTIIKPFLKDKTRKRIFLHGNNLNSLHQLIHPD-CL 245

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG32407	NP_001261456.1	CRAL_TRIO	92..233	CDD:279044	33/146 (23%)
clvs1	XP_012819596.1	CRAL_TRIO_N	29..75	CDD:215024	7/45 (16%)
clvs1	XP_012819596.1	SEC14	106..252	CDD:238099	33/143 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910