DRSC/TRiP Functional Genomics Resources

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Protein Alignment PXo and VTC3

DIOPT Version :10

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_015306.1 Gene:VTC3 / 856088 SGDID:S000005940 Length:835 Species:Saccharomyces cerevisiae


Alignment Length:168 Identity:49/168 - (29%)
Similarity:68/168 - (40%) Gaps:42/168 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAMLYAAIEQSPSAELVEREMVTRYFAKFDEEFFHYCDKE 65
            |.|...|...:.|.|:..||:||.:|.:|..::...      .|..|..:..:.:.:|....|||
Yeast     1 MLFGIKLANDVYPPWKDSYIDYERLKKLLKESVIHD------GRSSVDSWSERNESDFVEALDKE 59

  Fly    66 LAKINTFYSEKMAEATRKYGSLRSELTEALEMGHPKKLPAWKRRTPLGKKNVPARKIQDLKLAFS 130
            |.|:.||...|.....||...| .|.|::                        |.|||.:.   |
Yeast    60 LEKVYTFQISKYNAVLRKLDDL-EENTKS------------------------AEKIQKIN---S 96

  Fly   131 EFYLGLI--------LLQNYQNLNFTGFRKILKKHDKL 160
            |.:...:        .|.|:..||||||.||:||||||
Yeast    97 EQFKNTLEECLDEAQRLDNFDRLNFTGFIKIVKKHDKL 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898 45/164 (27%)
EXS 260..600 CDD:460816
VTC3NP_015306.1 SPX_VTC2_like 2..133 CDD:269901 45/164 (27%)
PolyPPase_VTC2-3_like 199..553 CDD:143630
VTC1 673..803 CDD:227589
Blue background indicates that the domain is not in the aligned region.

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