DRSC/TRiP Functional Genomics Resources

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Protein Alignment PXo and VTC4

DIOPT Version :10

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_012522.2 Gene:VTC4 / 853441 SGDID:S000003549 Length:721 Species:Saccharomyces cerevisiae


Alignment Length:226 Identity:48/226 - (21%)
Similarity:96/226 - (42%) Gaps:45/226 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFAEHLTAHITPEWRKQYINYEEMKAMLYAAIEQSPSAELVEREMVTRYFAKFDEEFFHYCDKE 65
            |||.|||:..:..::...||:|:::|..|...:.::..          ::..:.:.:|....:.|
Yeast     1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSKNNG----------QWTQELETDFLESLEIE 55

  Fly    66 LAKINTFYSEKMAEATRKYGSLRSELTEALEMGHPKKLPAWKRRTPLGKKNVPAR-KIQDLKLAF 129
            |.|:.||...|.:|..|:...::.::...:.:              |...|.|.: ..:.|:...
Yeast    56 LDKVYTFCKVKHSEVFRRVKEVQEQVQHTVRL--------------LDSNNPPTQLDFEILEEEL 106

  Fly   130 SEFYLGLILLQNYQNLNFTGFRKILKKHDK----LLSVDYGARWRTDHVEAAHFYTNKDIDRLIQ 190
            |:....:..|..:..||:|||:||:|||||    :|...:..|     :::..|: .::.|.|:.
Yeast   107 SDIIADVHDLAKFSRLNYTGFQKIIKKHDKKTGFILKPVFQVR-----LDSKPFF-KENYDELVV 165

  Fly   191 ETEQ----------AVTQDIEGGDRQRAMKR 211
            :..|          .:..|...|.:|:...|
Yeast   166 KISQLYDIARTSGRPIKGDSSAGGKQQNFVR 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898 35/157 (22%)
EXS 260..600 CDD:460816
VTC4NP_012522.2 SPX_VTC2_like 2..136 CDD:269901 35/157 (22%)
PolyPPase_VTC4_like 191..478 CDD:143623 2/6 (33%)
DUF202 593..721 CDD:447870
Blue background indicates that the domain is not in the aligned region.

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