DRSC/TRiP Functional Genomics Resources

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Protein Alignment PXo and erd1

DIOPT Version :10

Sequence 1:NP_648000.1 Gene:PXo / 38666 FlyBaseID:FBgn0035649 Length:671 Species:Drosophila melanogaster
Sequence 2:NP_592955.2 Gene:erd1 / 2541909 PomBaseID:SPAC227.01C Length:373 Species:Schizosaccharomyces pombe


Alignment Length:261 Identity:70/261 - (26%)
Similarity:113/261 - (43%) Gaps:65/261 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   383 ADFWLADQLNSMVPAFLDIPFLICFFGRSPTWHKAGKAASHCVEYVS-LLHPIVAIMPAYFRFAQ 446
            ||.|||..             ::.:...||.       .||..:|.: ::..::|..|...||.|
pombe   157 ADLWLAGA-------------ILIYVTDSPN-------NSHRKQYENEVIMSMIAAYPYAIRFRQ 201

  Fly   447 CI--RRYRD-TKESFPHLVNAAKYATSF---FVVIFAHKYHTTTDTYPLSKENPWFYCWITAAIF 505
            |:  |...| :.:.|...:|:.||.|:|   |:.|||.|..:..          || .|.|::..
pombe   202 CLIERSSADNSSDKFWSTLNSIKYFTAFPAIFLGIFAKKRFSFL----------WF-LWNTSSAI 255

  Fly   506 SSCYAYTWDIKMDWGLFDSKAGDNRFLREEIVYSSTWF--------YYFGIIE--DLILRFSWTL 560
            :|.|::.||:.|||.|        .|.::.:...:..|        :.|.::.  |.:||.:|.:
pombe   256 NSTYSFWWDVSMDWSL--------PFFKQPLSIQNWKFGVRRLFPTFTFAVVSAIDFVLRMAWVV 312

  Fly   561 S-MSLIEAGYIEGDVMMTILSPLEVFRRFIWNYFRLENEHLNNVGKFRAVRDISVAPMDCSDQTT 624
            . :...::.:...|..:.|:..||||||.:|.:||:|.|    ..|..|..:||    |.||..|
pombe   313 RVLPEHQSAFFTTDFGIFIMQFLEVFRRCVWVFFRIEAE----ASKSLAYVNIS----DRSDIPT 369

  Fly   625 I 625
            |
pombe   370 I 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PXoNP_648000.1 SPX_XPR1_like 2..159 CDD:269898
EXS 260..600 CDD:460816 61/234 (26%)
erd1NP_592955.2 EXS 14..351 CDD:460816 60/232 (26%)
Blue background indicates that the domain is not in the aligned region.

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