DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and OCT3

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_173089.1 Gene:OCT3 / 838209 AraportID:AT1G16390 Length:518 Species:Arabidopsis thaliana


Alignment Length:577 Identity:145/577 - (25%)
Similarity:236/577 - (40%) Gaps:126/577 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 SETSL-PRRSWETDDYIDFDDLLPMIGQFGRFQIRLFLFMIPFC--------FITAFVYLGQIFM 134
            ||::| |.||.|       :.:...||.||..|. |...::.|.        |||.|..      
plant    15 SESNLPPPRSLE-------ETIERCIGDFGWAQF-LQAALVSFAWFFDAQQTFITVFTD------ 65

  Fly   135 CLTPPKYYCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYNTNYTKIHFAENPSAYINTSLPTI 199
              :.|.::|                   ...|...|.|   ||:              :::|.|:
plant    66 --SQPMWHC-------------------DNSDRVDSVC---NTS--------------SSNLCTL 92

  Fly   200 PCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFAD-HCGRVAALV 263
            |   ...:..:.....|...|:|..|.......:....||||.::||||....|| ..||...|:
plant    93 P---NQTWSWDLNPHVSIISEWGLQCAGSFLKGFPASSFFLGCLIGGLALSTLADSSLGRKNMLL 154

  Fly   264 SSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLSLALFY 328
            .||.:..:.|:.|:.||..:.:|..|||.|....|..|...:|..|.||.|:|..|..:....|.
plant   155 LSCLIMSLSSMLTAFSTSIWVYAFLRFLNGCGRATIGTCALVLSTELVGKKWRGQVGAMGFFCFT 219

  Fly   329 SPFTMVMPWIA-LSAGN-WRRFSSFTSLPIVLAMFSFCLL-----PESARWLVSVGEIDKALEIL 386
            ..| :.:|.:. ::.|| ||....:||:|.::    :|.|     .||.|||:..|..::|:.||
plant   220 LGF-LSLPMLGYINEGNSWRNLYVWTSIPTLI----YCCLVRSFVRESPRWLIVKGRKEEAVSIL 279

  Fly   387 KNV-------------IEVNKKQVSKEILDLFEASCTQFYKEELDGRDFTVLSIFKRKRMA-RYM 437
            :::             .||...| ||...|:::|                 |.|..||..: |.:
plant   280 QSIASNAITMSFTNLCFEVENDQ-SKSNPDVYDA-----------------LKILVRKSWSFRRL 326

  Fly   438 ILMILIWMSISLVYDGHVRAASVLDSENIFLFFTIACATELPGNILVILTLDRAGRRWCSFFYTS 502
            :..:::...|.:||.|...|.:.|:. |::|.......:|.|..::....:|:..||.....:|:
plant   327 LAAMVVGFGIGMVYYGMPLALTNLNF-NLYLGVVFNALSEFPAFLITFFFIDKINRRDALIGFTA 390

  Fly   503 LSGVFS-LLGASFQNRANMRMSALAGRFFSNIC--YNIGLQWAAEILPTVVRAQGVAFIHTMGFV 564
            |||:.| |:....|...::::......||| .|  :|:.|.:..|:.||.||...::.:......
plant   391 LSGISSALIAVLGQQLGSLQIVLELVSFFS-ACTAFNMTLIYTIEMFPTCVRNSAISMVRQALVF 454

  Fly   565 AMLMSPPVVYLSKKSLSSTLIVLGALGIFG---GLLALF---LPETLNHELPETLSD 615
            ..:.||.:|...:::      ...:.|:||   ||..||   ||||....|.:|:.:
plant   455 GGVFSPVMVAAGREN------QFWSYGLFGLIIGLCGLFVFGLPETRGSVLCDTMDE 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 136/546 (25%)
MFS 231..602 CDD:119392 107/401 (27%)
OCT3NP_173089.1 MFS_OCT_plant 87..492 CDD:340936 114/438 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.