DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and Slc22a4

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_071606.1 Gene:Slc22a4 / 64037 RGDID:621149 Length:553 Species:Rattus norvegicus


Alignment Length:559 Identity:134/559 - (23%)
Similarity:242/559 - (43%) Gaps:51/559 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DFDDLLPMIGQFGRFQIRLFLFMIPFCFI-TAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKE 158
            |:|:::..:|.:|.|| ||..|::....| ..|..:..:|:..| |::.|.||..::.....|..
  Rat     3 DYDEVIAFLGDWGPFQ-RLIFFLLSASIIPNGFNGMSVVFLAGT-PEHRCLVPHTVNLSSAWRNH 65

  Fly   159 LSIPKE-KDGSY--SRCRMYN----TNYTKIHFAENPSAYIN-TSLPTIPCKKGYVFEQEGRAFE 215
             |||.| |||..  ..||.|.    .|::.:..  .|...:: ..|....|..|:.:.::  .|.
  Rat    66 -SIPLETKDGRQVPQSCRRYRLATIANFSALGL--EPGLDVDLEQLEQESCLDGWEYSKD--VFL 125

  Fly   216 SATM-EFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSLATSMS 279
            |..: |:..:|:||........:||:|.:.|....|..:|..||...|.::..:....|.....|
  Rat   126 STIVTEWNLVCEDDWKTPLTTSLFFVGVLCGSFVSGQLSDRFGRKKVLFATMAVQTGFSFVQIFS 190

  Fly   280 TDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLSLALFYSPFTMVMPWIALSAGN 344
            |::..|.:...:||....:.:.:.:||..|.:....|.|.:.|.:..|::...||:|..|....:
  Rat   191 TNWEMFTVLFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFAIGYMVLPLFAYFIRD 255

  Fly   345 WRRFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASC 409
            ||......:||.:..:..:..:|||.|||:|....::|.:|::...::|.......|.|..|...
  Rat   256 WRMLLLALTLPGLFCVPLWWFIPESPRWLISQRRFEEAEQIIQKAAKMNGIMAPAVIFDPLELQE 320

  Fly   410 TQFYKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYDGHVRAASVLDSEN----IFLFF 470
            ....|::    ...:|.:||.:.:|...::.:::||..|:.|     .|..|:..|    ::|..
  Rat   321 LNSLKQQ----KVFILDLFKTRNIATITVMSVMLWMLTSVGY-----FALSLNVPNLHGDVYLNC 376

  Fly   471 TIACATELPGNILVILTLDRAGRRWCSFFYTSLSGVFSLLGASF---------QNRANMRMSALA 526
            .::...|:|......|.|....||:.      ::||....|...         .|..::.: .:.
  Rat   377 FLSGLIEVPAYFTAWLLLRTLPRRYI------IAGVLFWGGGVLLLVQVVPEDYNFVSIGL-VML 434

  Fly   527 GRFFSNICYNIGLQWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGALG 591
            |:|.....:::...:.||:.||:||...|........|..:::|..|||...:.....|::|:|.
  Rat   435 GKFGVTSAFSMLYVFTAELYPTLVRNMAVGITSMASRVGSIIAPYFVYLGAYNRLLPYILMGSLT 499

  Fly   592 IFGGLLALFLPETLNHELPETLSD-----GAQFGKNQRI 625
            :..|::.||.||:....|||.|..     |.:.||...:
  Rat   500 VLIGIITLFFPESFGVTLPENLEQMQKVRGFRCGKKSTV 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 127/530 (24%)
MFS 231..602 CDD:119392 86/383 (22%)
Slc22a4NP_071606.1 2A0119 12..519 CDD:273328 126/529 (24%)
MFS 123..510 CDD:119392 92/402 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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