DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and sv2a

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_696434.2 Gene:sv2a / 568033 ZFINID:ZDB-GENE-131001-1 Length:733 Species:Danio rerio


Alignment Length:806 Identity:147/806 - (18%)
Similarity:238/806 - (29%) Gaps:355/806 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ANDEKG--NASTE---DDDKPKKREHRDQGQQSKLKKIKYYIEPDKVDIGIQAGDSLEKVKVTYV 61
            |||::|  :.|||   :||:..:.|::                      ||...||:||.     
Zfish    74 ANDDEGAHSDSTEGHDEDDEIYEGEYQ----------------------GIPRNDSVEKA----- 111

  Fly    62 EPDDEESSHGFFWGKKKSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQIRLFLFMIPFC----- 121
              |.:..:.|....:..::....||..:.:....::.:|...|. ||||..|: |::...     
Zfish   112 --DRQVGAVGQSQFRDMTQYEGERRKDQEELAQQYETILQECGH-GRFQWTLY-FVLGLALMADG 172

  Fly   122 ---FITAFVY-LGQIFMCLTPPKYYCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYNTNYTKI 182
               |:..||. ..:..|||:.|                                           
Zfish   173 VEIFVVGFVLPSAEKDMCLSEP------------------------------------------- 194

  Fly   183 HFAENPSAYINTSLPTIPCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGSILGGL 247
                               .||.:                            .:|.:||.::|..
Zfish   195 -------------------NKGML----------------------------GLIVYLGMMVGAF 212

  Fly   248 AYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVG 312
            .:|..||..||...|:.|..:..|.:..:|....:.:|...|.|.|........:|:....|::.
Zfish   213 VWGGLADRIGRRQTLLISLSINSVFAFFSSFVQGYSSFLFCRLLSGVGIGGSIPIVFSYYSEFLA 277

  Fly   313 PKYRTLVANLS-LALFY---SPFTMVMPWI-------------ALSAGNWRRFSSFTSLPIVLAM 360
            .:.|.  .:|| |.:|:   ..:...|.|.             |....:||.|....:.|.|.|:
Zfish   278 QEKRG--EHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVAAI 340

  Fly   361 FSFCLLPESARWLVSVGEIDKALEILKNVIEVNK------------------KQVSKEILDL--- 404
            .:...:|||.|:.:..|:.|:|..|||.|.:.|.                  ||:. |::|:   
Zfish   341 AALTTMPESPRFYLENGKHDEAWMILKQVHDTNMRAKGYPERVFSVTTIKTVKQMD-ELVDMGGE 404

  Fly   405 -------FEASCTQFYKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYDG--------- 453
                   :....|..: .::.|...||.:  ...|...||  |:.:|.|:|..|.|         
Zfish   405 ATAWHQRWRIKLTNLF-HQVWGNFLTVFN--PEYRRITYM--MMAVWFSMSFSYYGLTVWFPDMI 464

  Fly   454 ---------------------HVRAASVLD----------------------------------- 462
                                 ||.....|:                                   
Zfish   465 KYLQKQEYSSRTKVFIKEKVEHVTFNFTLENQIHRNGEYFNNKFLNLKMKSMVFEDSLFEECYFE 529

  Fly   463 ---SENIF---------LFFTI----------------------ACATE---------------- 477
               |.|.|         ||:..                      .|..:                
Zfish   530 DITSSNTFFRNCTFISTLFYNTDLFKYRLINSKLINSTFLHNKEGCMLDFSDENNAYMIYFVSFL 594

  Fly   478 -----LPGNILVILTLDRAGRRWCSFFYTSLSG--VFSLLGASFQNRANMRMSALAGRFFSNICY 535
                 |||||:..|.:|:.||      ...|:|  |.|.:...|.:..|...:.:|     .:|.
Zfish   595 GTLAVLPGNIVSALLMDKIGR------LRMLAGSSVISCVSCFFLSFGNSESAMIA-----LLCL 648

  Fly   536 NIGL---QWAA------EILPTVVRAQGVAFIHTM-------------GFVAMLMSPPVVYLSKK 578
            ..|:   .|.|      |:.|:..|.....|::.:             .||.:..:.|:::.|  
Zfish   649 FGGISIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFQSFVGITKAVPILFAS-- 711

  Fly   579 SLSSTLIVLGALGIFGGLLALFLPET 604
                     |||.. |..|||.||||
Zfish   712 ---------GALAA-GSFLALKLPET 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 126/699 (18%)
MFS 231..602 CDD:119392 106/559 (19%)
sv2aXP_696434.2 synapt_SV2 1..733 CDD:130366 147/806 (18%)
MFS 162..725 CDD:119392 116/683 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.