DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and sv2ca

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_001121811.1 Gene:sv2ca / 562345 ZFINID:ZDB-GENE-060526-233 Length:745 Species:Danio rerio


Alignment Length:823 Identity:155/823 - (18%)
Similarity:245/823 - (29%) Gaps:357/823 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EDDDKPKKREHRDQGQQSKLKKIKYYIEPDKVDIGIQAGDSLEKVKVTYVEPDDEESSHGFF--- 73
            ||||                    ||.:||......||.|.......|....|::|...|.:   
Zfish    54 EDDD--------------------YYSQPDGNYTSHQANDEEGSSDATEGHDDEDEIYEGEYQGI 98

  Fly    74 ------------WGKKKSETSLPRRSWETDDYIDFDDL---LPMIGQ---FGRFQIRLFLFMIPF 120
                        .|:..|:....||..|.:...|.::|   ..:|.|   .||||.:|| |.:..
Zfish    99 PSDAKARDGQVALGQPLSDGLKDRRELENERQADEEELAQQYELIIQECGHGRFQWQLF-FTLGL 162

  Fly   121 C--------FITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYNT 177
            .        |:..||.                                                 
Zfish   163 ALMSDGVEVFVVGFVL------------------------------------------------- 178

  Fly   178 NYTKIHFAENPSAYINTSLPTIPCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGS 242
                      |||..:..:|                 :|::   |||..          |.:||.
Zfish   179 ----------PSAETDMCVP-----------------DSSS---GWLGS----------IVYLGM 203

  Fly   243 ILGGLAYGHFADHCGRVAALVSSCFLALVGSLA--TSMSTDFFTFAISRFLVGASYDTCFTMVY- 304
            ::|...:|..||..||...|: .| ::|.|..|  :|....:..|.:.|.:.|........:|: 
Zfish   204 MVGAFFWGGMADKVGRRQCLL-IC-MSLNGFFAFLSSFVQGYGLFLLCRMIAGFGIGGAVPIVFS 266

  Fly   305 ----ILVLEYVG-------------------------PKYRTLVANLSLALFYSPFTMVMPWIAL 340
                :|..|..|                         |.|..:....|..:.|..:|   .| :.
Zfish   267 YFAEVLAREKRGEHLSWLCMFWMIGEIYASAMAWAIIPHYGQITTASSQFINYHHYT---SW-SF 327

  Fly   341 SAG------NWRRFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILK------------ 387
            |.|      :||.|....:||.|.|:.:...:|||.|:.:.||:.|:|..|||            
Zfish   328 SMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVGKHDEAWMILKQIHDTNMRARGQ 392

  Fly   388 --NVIEVNKKQVSKEI---LDLFEASCTQFY-------KEELDGRDFTVLSIFKRKRMARYMILM 440
              .|..||:.::.|:|   :::.|:.  .|:       |.||.|.....|..|... :....:.:
Zfish   393 PEKVFTVNRIKIPKQIDEFVEMHESG--NFFSKAIFRIKTELHGIWLNFLKCFNYP-VKESTVKL 454

  Fly   441 ILIWMSISLVY----------------DGHVRAASVLDSENI--FLF-FTI-------------- 472
            .::|:::|..|                |.:.......::|.|  |.| ||:              
Zfish   455 AIVWLTLSFGYYGLSVWFPDVIKHLQNDEYASKGQRHNNERIEDFTFNFTLENQIHTNSLFINDR 519

  Fly   473 -----------------ACATE------------------------------------------- 477
                             :|..|                                           
Zfish   520 FINMKFKSVTFINSTFQSCFFEDVTSVGSFFRNCTFIEAVFYNTDIDDSKLKNTDVINSTFYHNK 584

  Fly   478 ---------------------------LPGNILVILTLDRAGRRWCSFFYTSLSGV---FSLLGA 512
                                       |||||:..|.:|:.||.....|...|||:   |...|.
Zfish   585 TGCQMTFEDDYSAYWVYFVNFLGTLAVLPGNIVSALLMDKIGRLSMLGFSMILSGISCFFLWFGT 649

  Fly   513 SFQNRANMRMSALAGRFFSNICYNIGLQWAA---------EILPTVVRAQGVAFIHTMGFVAMLM 568
            |......|            :|...||..:|         |:.||..|..|..|.:.:..:|.:|
Zfish   650 SESMMIGM------------LCLYNGLSISAWNSLDVVTTELYPTDRRGTGFGFCNALCKLAAVM 702

  Fly   569 SPPVVYLSKKSLSSTLIVLGALGIF--GGLLALFLPETLNHEL 609
            . .:::.|...::..:.:|.|..:.  |||:.|.||:|.::.|
Zfish   703 G-NLIFGSLVGITKAIPILLASSVLVGGGLVGLRLPDTRSNVL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 132/713 (19%)
MFS 231..602 CDD:119392 109/566 (19%)
sv2caNP_001121811.1 synapt_SV2 3..745 CDD:130366 155/823 (19%)
Spt5_N 73..>141 CDD:288770 12/67 (18%)
MFS 157..>360 CDD:119392 50/298 (17%)
MFS 588..>711 CDD:119392 30/135 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.