DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10486 and Svopl

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:469 Identity:112/469 - (23%)
Similarity:189/469 - (40%) Gaps:115/469 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 AFESATMEFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSLATS 277
            |..|..:...|..::.:.|....::|| |.::..:.:|..||..||...|:.|.......||.||
  Rat    21 AVVSPVIRCEWQLENWQVAFVTTMVFF-GYMVSSILFGLLADRYGRWKILLLSFLWGAYFSLLTS 84

  Fly   278 MSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLS----LA---LFYSPFTMVM 335
            .|..:..|...|.:||... :......|:..|::..|||..:..||    ||   |..|..::|:
  Rat    85 FSPSYIWFVFLRTMVGCGV-SGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVI 148

  Fly   336 PWIALSAGNWRRFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKK----- 395
            |.|     .||......|:|.::.:.:|..:|||||:.||.|....||:.|:::.::|:.     
  Rat   149 PTI-----GWRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMPEG 208

  Fly   396 QVSKEIL-------DLFEASCTQFYKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYDG 453
            ::.:.||       ||.|:...:           |.|.|:             :||:.||..|.|
  Rat   209 RLVEPILEKRGRFADLLESKYLR-----------TTLQIW-------------IIWLGISFAYYG 249

  Fly   454 HVRA-ASVLDSENIFLFFTIACATELPGNILVILTLDRA--GRR--WCSFF----YTSLSGVFSL 509
            .:.| |.:|:.:       :.|.::......|:..:..|  ||.  :|..|    |.::  :.|.
  Rat   250 VILASAELLERD-------LVCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTM--IIST 305

  Fly   510 LGASFQNRANMRMSALAGRFFS---------------NIC--------------------YNIGL 539
            ||....|..|:......||..|               |||                    :|...
  Rat   306 LGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIY 370

  Fly   540 QWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGALGIFG------GLLA 598
            .:.||:.||.:||.|:....::..:..:::|   ::|:..:|::.  ||||.:|.      .:.|
  Rat   371 IYTAEVYPTPMRALGMGTSGSLCRIGAMVAP---FISQVLMSASF--LGALCLFSSVCVVCAISA 430

  Fly   599 LFLP-ETLNHELPE 611
            ..|| ||....|.:
  Rat   431 FTLPIETKGRALQQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 112/469 (24%)
MFS 231..602 CDD:119392 104/439 (24%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 107/457 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347246
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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