DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and CG4459

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster


Alignment Length:662 Identity:127/662 - (19%)
Similarity:243/662 - (36%) Gaps:167/662 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 KSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQIR----LFLFMIPFCFITAFVYLGQIFMCLTP 138
            :|..|:||:|....|.::     .:.|.|||:|:|    :||..||..:.||.:       ..|.
  Fly     5 QSMGSIPRKSSPELDVVE-----QVNGSFGRWQLRTILLIFLCKIPSAWFTAII-------IYTA 57

  Fly   139 PKYYCYVPELLHTPVELRKELSIPKEKDGSY-------SRCRMYNTNYTKIH-------FAENPS 189
            |  |.:..||:..|.:.....|..:..|.::       |..|::|.:....:       |..:..
  Fly    58 P--YPWKGELVCHPADWNVSRSQTEHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRSHG 120

  Fly   190 AYINTS-------LPTIPCKKGYVFEQEGRA-FESATMEFGWLCDDDKYATYAQIIFFLGSILGG 246
            ...|.|       ..::||:     ..|.|. ::|...:|..:|.........|....||:::||
  Fly   121 QEWNASQSKEPGGQSSLPCE-----HVEHRTDYKSLISQFDLICSRRVLVALTQSFHALGALIGG 180

  Fly   247 L-AYGHFADHCGRVAALVSSCFLALVGSLATSMST---DFFTFAISRFLVGASYDTCFTMVYILV 307
            | ||........|...|     |.::|.:.....|   |.:...|        |..|.|.::..:
  Fly   181 LMAYSALKKISPRRLML-----LGMIGQIFCGNLTGLVDTYQLHI--------YFRCLTSIFCAL 232

  Fly   308 L---------EYVGPKYRTLVANLSLALFYSPFTMVMPWIALSAGNWRRFSSFTSLPIVLAMFSF 363
            :         :....|.|.:|..|| .||:|...:::|.|::...||.......|..:::.::..
  Fly   233 MYTSGQFILNDITSGKARIIVVTLS-ELFWSMGLVLLPAISIYFDNWSYLYVAISSSLIVLVWLH 296

  Fly   364 CLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASCTQFYKEELDGRD---FTVL 425
            ..:.::.|||:....::.||..|......|.::|...:    :...| .|..:||.:.   .:..
  Fly   297 RWIADAPRWLLQHQRVEAALRQLLESATYNNRKVPLTL----DVQLT-MYANDLDQKSKQKHSYC 356

  Fly   426 SIFKRKRMARYMILMILIWMSISLVYD-------------GHVRAASVLDSENIFLFFTIACATE 477
            .::..:.....::.:.|||....::|:             .||..|::..:|.:.||.       
  Fly   357 QVWDGETKRSQLVYIHLIWGGAMVLYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFV------- 414

  Fly   478 LPGNILVILTLDRAGRRWCSFFYTSLSGVFS-LLGASFQNRANMRMSALAGRFFSNICYNIGLQW 541
              |..|::.|  |...||...... ::|:.: |:....:...|.|              .:||:.
  Fly   415 --GLYLILYT--RRHWRWAGNLMI-IAGLSTYLIWLLPETERNSR--------------RVGLEL 460

  Fly   542 AAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGALGIFGGLLALFLP---- 602
            ...::..:..:..:|.:.|       .:..:|...|:    .:::|..:. |..:..||.|    
  Fly   461 VFWLILKIANSASIAVLTT-------CTSEIVSKEKR----VVLMLSVIS-FSRVCLLFCPFLSC 513

  Fly   603 -ETLNHELPETLSDGAQFGKNQRIWHMPCCGPGSRKSHPRHNWHQGSSLRTLSK-----DEFRSS 661
             ..::|.:|.|:.  |..|                       |..|.:||.|::     ::.:.|
  Fly   514 LTVIHHLVPITIL--ATMG-----------------------WIYGLALRRLNRYYWNTEQPQIS 553

  Fly   662 KMYRKTKYRFES 673
            ::.....||.:|
  Fly   554 QVPTPNTYRRQS 565

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 109/568 (19%)
MFS 231..602 CDD:119392 73/400 (18%)
CG4459NP_650850.1 2A0119 26..536 CDD:273328 114/605 (19%)
MFS 164..540 CDD:119392 83/457 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458364
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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