DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and CG4462

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_650849.1 Gene:CG4462 / 42376 FlyBaseID:FBgn0038752 Length:573 Species:Drosophila melanogaster


Alignment Length:565 Identity:113/565 - (20%)
Similarity:204/565 - (36%) Gaps:133/565 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DDLLPMIGQFGRFQIR----LFLFMIPFCFITAFV-------YLGQIFMCLTPPKY--------- 141
            |.:..::|.||.:|:|    :||..||..:..|.:       |.|..|.|.|  .|         
  Fly    41 DVIADVVGDFGIWQLRTILIIFLCKIPAAWFMACIIFTGPELYPGSEFTCDT--SYLTSSSNSSF 103

  Fly   142 -----YCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYNTNYTKIHFAENPSAYINTSLPTIPC 201
                 .|||.:                |..|:.|.|..:|              |::        
  Fly   104 SISDNQCYVLD----------------ESTGTSSECEQFN--------------YVS-------- 130

  Fly   202 KKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGSILGG-------LAYGHFADHC-GR 258
                       :|:|..|:|..:|..|.:..:.|.....|.::||       |.....:.:| |.
  Fly   131 -----------SFDSLIMQFNLVCLRDIFVAWTQYWHLFGVLVGGVMGTKMMLGISPRSTYCVGA 184

  Fly   259 VAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLS 323
            ||.::  |      .:.|..:.||......|.|........||....:..:.....:| :.|.:.
  Fly   185 VAQIL--C------GVVTGYARDFSLHCAFRCLSAVCCAIMFTAGQAIFADITAGMHR-IGAIIL 240

  Fly   324 LALFYSPFTMVMPWIALSAGNWRRFSSFTSLPIVLAMFSFCLLPESARWLVSVG----EIDKALE 384
            ...|:|...:::|.::....:|.......:.|.::.:......|:|.|||:...    .||...:
  Fly   241 YDTFWSIGVILLPGLSSFFNSWSLIYVGITFPTIMLILLLYWTPDSPRWLLRHAADRFSIDNVEQ 305

  Fly   385 ILKNVIEVNKKQVSKEILDLFEASCTQFYKEELDGR----DFTVLSIFKRKRMARYMI------- 438
            ||:....:|.:  |.:|...|.....|. .|.|..:    .:|  .::|.||...:|:       
  Fly   306 ILREGAAINDR--SFKIPPDFRQQLEQL-SERLKAQPPPAPWT--ELWKGKRAKTHMVAAHLALA 365

  Fly   439 LMILIWMSISLVYDGHVRAASVLDSENIFLFFTIACA-TELPGNILVI-LTLDRAGRRW-CSFFY 500
            ..::.:|.:.|    ::|:.    ..:..:..|||.. :|:.|..|.: .||.....:| |:..:
  Fly   366 FFVINFMGMLL----NIRSF----GRDYLVPNTIAMGFSEIIGCFLALHFTLKHNKWKWQCAGVF 422

  Fly   501 TSLSGVFSLLGASFQNR----ANMRMS-----ALAGRFFSNICYNIGLQWAAEILPTVVRAQGVA 556
            ..|:|:...:|..|.|.    |::::|     |...:...:...::.|....|::|...:...|.
  Fly   423 NILAGILGCMGWIFTNADSMDADLKVSLWMIIATIPKAAVSCAQSMILACMNELMPANKKQLFVF 487

  Fly   557 FIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGALGIFGGLLALFL 601
            .:.|...|.:|.:|....|.|...:.:|.......|.||:....|
  Fly   488 SVVTWARVWLLSAPFFNVLRKIDTAMSLTSYCVFSILGGICTSLL 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 112/558 (20%)
MFS 231..602 CDD:119392 81/406 (20%)
CG4462NP_650849.1 2A0119 <126..532 CDD:273328 88/460 (19%)
MFS 149..>284 CDD:119392 24/143 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458376
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.