DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and slc22a4

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:546 Identity:138/546 - (25%)
Similarity:237/546 - (43%) Gaps:52/546 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DFDDLLPMIGQFGRFQIRLFLFMIPFCFITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKEL 159
            |:||:...:|.:|.||:.:||.:........||.|..:|:..| |.:.|.:||.::.. .:.::.
Zfish     3 DYDDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDT-PAHECLIPEQINIS-SVWRDA 65

  Fly   160 SIPKE-KDGSYSR--CRMYN---------TNYTKIHFAENPSAYINTS-LPTIPCKKGYVFEQEG 211
            :||.: :||...|  |..|.         .|||       |:..:|.| :.|.||..|:.:.|| 
Zfish    66 AIPTQMQDGVLKRSSCSRYRLDTLRQLSMLNYT-------PNVEVNLSQIETEPCVDGWSYSQE- 122

  Fly   212 RAFESATMEFGW--LCDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSL 274
              |..:|:...|  :|:.:........|:|.|.::|....|..:|..||...|.:...|..:..|
Zfish   123 --FYQSTIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFTMMALQTITIL 185

  Fly   275 ATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLSLALFYSPFTMVMPWIA 339
            ....|..:..|:...|.||.|..:.:.:.|:|..|.:.|..|.|..:|.:.:......|..|..|
Zfish   186 IQMFSPSWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGSGIGQMFFPLAA 250

  Fly   340 LSAGNWRRFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEIL-- 402
            ....:||......:|..:|....:..:|||.|||:|.|...:|..:|:...|.|:....:.|.  
Zfish   251 YFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAPEVIFSS 315

  Fly   403 -DLFEASCTQFYKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYDGHVRAASVLDSENI 466
             ::.||:..:..|.       ::|.|.........:::..|:||.|::.|     .|.:|::.|:
Zfish   316 SEIEEAAKKRIQKH-------SILDILSNCNAVSTILICSLLWMVITMSY-----YALILNTTNL 368

  Fly   467 ----FLFFTIACATELPGNILVILTLDRAGRRWCSFFYTSLSG----VFSLLGASFQNRANMRMS 523
                :|.|.::...|:|..|:..|.|....||.|......|.|    :..|:....|..|.  ..
Zfish   369 HGNPYLNFFLSAVVEVPAYIIAALLLRFCSRRICQASTLLLGGALIFIIQLIPTELQGLAT--AL 431

  Fly   524 ALAGRFFSNICYNIGLQWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLG 588
            .:.|:......:.:.....:|:.|||||...:........:..::||.::||.........||:|
Zfish   432 EMLGKLCVTAAFCVVYAVTSELFPTVVRNMAMGSCSMTARIGSIISPFIIYLGNYYRYIPYIVIG 496

  Fly   589 ALGIFGGLLALFLPETLNHELPETLS 614
            .|.:|.|:::|.|||:....||||::
Zfish   497 GLALFSGVMSLLLPESKGKVLPETIA 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 133/533 (25%)
MFS 231..602 CDD:119392 90/381 (24%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 133/533 (25%)
MFS 144..510 CDD:119392 90/379 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588477
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.950

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