DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and Svopl

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_011239688.1 Gene:Svopl / 320590 MGIID:2444335 Length:544 Species:Mus musculus


Alignment Length:629 Identity:138/629 - (21%)
Similarity:222/629 - (35%) Gaps:206/629 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 SLEKVKVTYVEPDDEESSHGFFWGKKKSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQIRLFLF 116
            ||.|:.....||..:|:         |:.|              .:|.:..|| ||||.|.|||.
Mouse    13 SLRKLSQAAPEPQQKET---------KTFT--------------VEDAVETIG-FGRFHIALFLI 53

  Fly   117 MIPFCFITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYNTNYTK 181
            |    ..|..|...:|.:                                               
Mouse    54 M----GSTGVVEAMEIML----------------------------------------------- 67

  Fly   182 IHFAENPSAYINTSLPTIPCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGSILGG 246
                      |....|.|.|:                    |..::.:.|....::|| |.::..
Mouse    68 ----------IAVVSPVIRCE--------------------WQLENWQVAFVTTMVFF-GYMVSS 101

  Fly   247 LAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYV 311
            :.:|..||..||...|:.|.......||.||.|..:..|...|.:||... :......|:..|::
Mouse   102 ILFGLLADRYGRWKILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGV-SGHAQGLIIKTEFL 165

  Fly   312 GPKYRTLVANLS----LA---LFYSPFTMVMPWIALSAGNWRRFSSFTSLPIVLAMFSFCLLPES 369
            ..|||..:..||    ||   |..|..::|:|.|     .||......|:|.::.:.:|..:|||
Mouse   166 PTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTI-----GWRWLIRIASIPGIILIMAFKFIPES 225

  Fly   370 ARWLVSVGEIDKALEILKNVIEVNKK-----QVSKEILDLFEASCTQFYKEELDGRDFTVLSIFK 429
            ||:.||.|....||..|:::.::|:.     |:.:.||             |..||...:|.   
Mouse   226 ARFNVSTGNTQAALNTLESIAKMNRSVMPEGQLVEPIL-------------EKRGRFADLLD--- 274

  Fly   430 RKRMARYMILMILIWMSISLVYDGHVRA-ASVLDSENIFLFFTIACATELPGNILVILTLDRAGR 493
             .:..|..:.:.:||:.||..|.|.:.| |.:|:.:       :.|.::......|:.|...:|.
Mouse   275 -SKYLRTTLQIWIIWLGISFAYYGVILASAELLERD-------LVCGSKSESEPEVVETTGDSGE 331

  Fly   494 R----WCSFF----YTSLSGVFSLLGASFQNRANMRMSALAGRFFS---------------NIC- 534
            .    :|..|    |.::  :.|.||....|..|:......||..|               ||| 
Mouse   332 GLSPCYCHIFAPSDYRTM--IISTLGEIALNPLNILGINFLGRRLSLSITMGCTALFFLLLNICT 394

  Fly   535 -------------------YNIGLQWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSL 580
                               :|....:.||:.||.:||.|:....::..:..:::|   ::|:..:
Mouse   395 SSAGLIGFLFMLRALVAANFNTIYIYTAEVYPTPMRAIGMGTSGSLCRIGAMVAP---FISQVLM 456

  Fly   581 SSTLIVLGALGIFG------GLLALFLP-ETLNHELPETLSDGA 617
            |::.  ||||.:|.      .:.|..|| ||....|..:.|..|
Mouse   457 SASF--LGALCLFSSVCVVCAISAFTLPIETKGRALQVSDSGSA 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 126/570 (22%)
MFS 231..602 CDD:119392 103/432 (24%)
SvoplXP_011239688.1 MFS_SVOPL 49..482 CDD:341000 115/551 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843821
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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