DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and suex-2

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_501556.2 Gene:suex-2 / 183742 WormBaseID:WBGene00008271 Length:502 Species:Caenorhabditis elegans


Alignment Length:550 Identity:110/550 - (20%)
Similarity:194/550 - (35%) Gaps:171/550 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LFLFMIPFCFITAFVYLGQIFMCLTPPKY-----YCYVPELLHTPVELRKELSIPKEKDGSYSRC 172
            :.|:.|...|....:::  ||:...|..|     :||..:                      |:|
 Worm    12 MVLYQITLIFSAQLIFV--IFLDFMPSTYCTDDNFCYKLQ----------------------SKC 52

  Fly   173 RM---YNT-NYTKIHFAENPSAYINTSLPTIPCKKGYVFEQEGRAFESATMEFGWLC---DDDKY 230
            .|   :|. |...::..||.|          .|    :.:.....|.||..|:...|   :....
 Worm    53 LMDYDHNAQNLCPVNMTENAS----------KC----IADHSRLFFRSAQFEYQQDCTGLNGFSL 103

  Fly   231 ATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGAS 295
            :|..    |:|::||.:|.|..||..||....:||....:...:.::..|:.::|.|.|.|:|.|
 Worm   104 STAT----FIGTLLGNIALGFLADKYGRRTIYLSSLLFGIPCVVLSAAITNIYSFYIFRILIGIS 164

  Fly   296 YDTCFTMVYILVLEYVGPKYRTLVANLSLALFYSP-FTMVMPWIALSAGNWRRFS------SFTS 353
            .....|:.:....|.:.|..|..:    ||....| ..|:...:|..:..|:..:      |..|
 Worm   165 VSGTLTVGWTYATEMISPNRRLRI----LAFSNWPNARMIQVGLAYISQEWKTATYICAAVSCLS 225

  Fly   354 LPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASCTQFYKEE-- 416
            |||::      .||||..||....:...|.:..|.:.::.|                 ||..|  
 Worm   226 LPILI------YLPESPIWLDQKQKYKNASKARKRLRKIGK-----------------FYSNEHS 267

  Fly   417 --LDGRDFTVLSIFKRKRMARYMILMILIWMSISL-VYDGHVRAASVLDSENIFL---------- 468
              :..|.||...|.|..::.....::|.::..:.| ||...:..|.:  ::|::|          
 Worm   268 TVVANRKFTPTRILKDPKLRNSFFMIIFMYFYVGLAVYITDLNGADM--TKNLYLGQFLSGLVLS 330

  Fly   469 --------------------FFTIA---------CATELPGNILVILTLDRAGRRWCSFFYTSLS 504
                                .|.||         |       ||:.|.|:..|    ||.|.|  
 Worm   331 IAQFIIGMTEPYLTGLGRRVLFLIAQFIAMLCYIC-------ILICLYLNWKG----SFLYLS-- 382

  Fly   505 GVFSLLGASFQNRANMRMSALAGRFFSNICYNIGLQWAAEILPTVVRAQGVAFIH---TMGFVAM 566
             .::|..|:                 .::|.........|::||.|||...:..:   .:|.:..
 Worm   383 -AYTLAYAT-----------------QSLCLEAAYLSLVELMPTDVRATAGSTANICMKIGTILA 429

  Fly   567 LMSPPVVYLSKKSL---SSTLIVLGALGIF 593
            .::.|:.:..:.||   :.::..:|.:.:|
 Worm   430 TLTKPLKFAYEPSLFFINLSICTIGMILVF 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 109/549 (20%)
MFS 231..602 CDD:119392 86/419 (21%)
suex-2NP_501556.2 MFS 108..460 CDD:391944 85/411 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.