DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and oct-2

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:672 Identity:158/672 - (23%)
Similarity:274/672 - (40%) Gaps:120/672 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 KKKSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQIRLFLFM----IPFCFITAFVYLGQIFMCL 136
            |:.:.|...|....||  |||:.:|.:||....:||.::|.:    :|.    |...|..::| :
 Worm   138 KQYASTKETRAKRLTD--IDFEGILQLIGGCSYWQIIVYLIISVQQVPH----AMFNLSVVYM-M 195

  Fly   137 TPPKYYCYVP---------ELLHTPVE----LRKELSIPK-----EKDGSYSRCRMYNTNYTKIH 183
            ..|.::|.:|         ||.:|...    |...::.|:     ..:..:.:|..:..:|  :|
 Worm   196 YQPDHWCKIPFFNEESFSAELGYTNYTWDQVLNSTIAFPRTFNKQRNELHHDQCHYFERDY--VH 258

  Fly   184 FAENPSAYI---NTSLPTIPCKKGYVFEQEGRAFE-SATMEFGWLCDDDKYATYAQIIFFLGSIL 244
            ...:|.|.:   |.:.....||:   :|.:....: :...|:..:||::....:..:.:.||.::
 Worm   259 IKLSPWAQVKDMNATGKINRCKE---WEYDTSVMDRTIVTEWNRVCDNNWSRAHVHMSYSLGYLV 320

  Fly   245 GGLAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLE 309
            |....|..:|..||..|:.....|.::.....:.|.:|..|.:.|||:.|:.:......|:|.:|
 Worm   321 GCFVGGFISDRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRFLLAATNEAADLAAYVLCME 385

  Fly   310 YVGPKYRTLVANLSLALFYSPFTMVMPW---------IALSAGNWRRFSSFTSLPIVLAMFSFCL 365
            ..|.|||::|.:|..|          ||         ||....:|........|..::::.....
 Worm   386 VTGTKYRSIVGSLIQA----------PWACGYAFLALIAYLTKSWTMIHLICVLLHIISLMLLYF 440

  Fly   366 LPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASCTQFYKEELDGRDFTVLSIFKR 430
            ||||.|||:...:..:|.:|::.....||.::..::..:..|...::.|.......|   .:|:.
 Worm   441 LPESPRWLILNNKTKQAEKIIREACHYNKSRLPSDLGLVRHAEKKKWMKHNEKPSYF---HLFRS 502

  Fly   431 KRMARYMILMILIWMSISLVYDGHVRAAS--------VLDSENIFLFFTIACATELPGNILVILT 487
            ..:....:::.::|::.:|||.|.|.|.|        |.|. |.||...:|.|.|||..:..:..
 Worm   503 SELRFRNVVLFIVWIATALVYYGMVIALSDQSSPGRRVFDG-NFFLNNAMAGAIELPTLVFCVFL 566

  Fly   488 LDRAGRRWCSFFYTSLSGVFSLLGASFQNRANMRMSALAGRFFSNIC----YNIGLQWAAEILPT 548
            | |.||:.........||:|.|.......|....: ||.....|..|    :||...:.:|:.||
 Worm   567 L-RMGRKRSQMLVLFGSGLFLLTSVVMVYRKQSTL-ALIFMLLSKACIQGSFNILYIFTSELNPT 629

  Fly   549 VVRAQGVAFIHTM---------GFVAML--MSPPVVYLSKKSLSSTLIVLGALGIFGGLLALFLP 602
            |||...|. |.:|         |::|:|  ::.|:|         .:.:.....:..|.|.|.||
 Worm   630 VVRNSAVG-ISSMVARMGAGASGYIAILSDVTMPLV---------PMTIFACFSLLAGCLVLLLP 684

  Fly   603 ETLNHELPETLSDGAQFGKNQRIWHMPCCGPGSRKSHPRHNWHQGSSLRTLSKDEFRSSKMYRKT 667
            ||....||:|:.|..|..|.    :...||..|           |:.|..:..|         ..
 Worm   685 ETQGLPLPDTILDSVQMVKR----NTKPCGTLS-----------GTFLGGIDDD---------AQ 725

  Fly   668 KYRFESHPSPSSSDYKGTEEKE 689
            .|..:..|..||.|.:..||::
 Worm   726 PYGGKLPPRVSSDDEEEEEEED 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 131/565 (23%)
MFS 231..602 CDD:119392 97/402 (24%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 98/420 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163149
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.