DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and pes-23

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_509167.2 Gene:pes-23 / 180963 WormBaseID:WBGene00003987 Length:520 Species:Caenorhabditis elegans


Alignment Length:542 Identity:112/542 - (20%)
Similarity:196/542 - (36%) Gaps:152/542 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 WLCDD--------DKYATYAQIIFFLGSILGGLAYGHFADHCGR-----VAALVSSCFLALVGSL 274
            |:.||        :......|:..|:||||    :|:.:||.||     .:.|:||..|.:.|.|
 Worm    69 WITDDTNVSVLWWENVIAIQQVGIFVGSIL----FGYISDHFGRQKVCQYSLLISSVILLVEGFL 129

  Fly   275 ATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLV---AN-------LSLALFYS 329
            ::::     ..|:.||::|........:.:.|..|.:.|:.|.|.   ||       |:|..|:|
 Worm   130 SSTI-----LIALCRFIIGTQTGAIIVVSWSLTTELISPRTRFLARAFANWPTGKFALALICFFS 189

  Fly   330 PFTMVMPWIALSAGNWR----RFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVI 390
            .             |||    ..::||....:|.:|   .:|||..:|...|:..:|..|     
 Worm   190 Q-------------NWRISLHVCAAFTLFGALLYIF---FVPESPTYLQCHGKRTEAHNI----- 233

  Fly   391 EVNKKQVSKEILDLFEAS---CTQFYKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYD 452
                      :.|:|:.|   |.......:..:..|...|:|:::....:||...||:..:.   
 Worm   234 ----------VADVFKNSNGKCVIALPGGIRSKPLTFRQIWKKEKYRNVIILFGSIWVMTNF--- 285

  Fly   453 GHVRAASVLDSENIFLFFTIACATEL-----PGNILVILTL--------DRAGRRWCSFFYTSL- 503
                .|::||...:.:|......:::     |....::|.|        .|......|.....: 
 Worm   286 ----TATMLDFSEVIIFHNNLILSQMLLAGVPAICKILLGLVEIYFGIISRRNLHLISLCINGIS 346

  Fly   504 ---SGVFSLLGASFQNRANMRMSALAG----RFFSNICYNIGLQWAAEILPTVVRAQGVAFIHTM 561
               |||..|.|..........:..|.|    .|..:.||    ....|.:||.||.........:
 Worm   347 MCASGVLILFGLQKNYPTIYVLVFLIGYASIEFIWDACY----LCVVEQVPTEVRGTISGACSFL 407

  Fly   562 GFVAMLMSPPVVYLSKKSLSSTLIVLGALGIFGGLLALFLPETLNHELPETLSDGAQFGK----- 621
            ..::.:::..:..:.::...:.|.:..|..|...|:|.|.   ||.      |..|..|:     
 Worm   408 SRLSGILASKMTIVKQRWEPAPLFIAFATAIIHFLIAFFF---LNE------SKDANLGEIGFTL 463

  Fly   622 ---NQRIWHMPCCGPGSRKSHPRHNWHQGSSLRTLSKDEFRSSKMYRKTKYRFESHPSPS---SS 680
               :|::         |:|.|         .:|.::|.|.:.|:         .:.|:.|   .:
 Worm   464 RRISQKV---------SQKIH---------QIRNMTKKEKQPSE---------STVPAVSKIRKN 501

  Fly   681 DYKGTEEKEIRTYKYGNGSKWP 702
            |..|....||   :.|.|:..|
 Worm   502 DISGPVLAEI---QLGEGNNVP 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 92/439 (21%)
MFS 231..602 CDD:119392 87/413 (21%)
pes-23NP_509167.2 2A0119 <82..458 CDD:273328 91/435 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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