DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and F17C11.12

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_505789.1 Gene:F17C11.12 / 179514 WormBaseID:WBGene00008923 Length:540 Species:Caenorhabditis elegans


Alignment Length:576 Identity:117/576 - (20%)
Similarity:220/576 - (38%) Gaps:149/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 DDLLPMIGQFGRFQIRLFLFMIPFCFITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKELSI 161
            ||||.|    ||:.|.|.:|:             ::.|          :.:|.:|.:.:      
 Worm    34 DDLLKM----GRYSILLCIFV-------------EVAM----------LSQLSNTMLMV------ 65

  Fly   162 PKEKDGSYSRCRMYNTNYTKIHFAENPSAYINTSLPTIPCK--KGYVFEQEGRAFESATMEFGWL 224
                   |:.......:...:.|:.|..|.::.|.    ||  |...||   |.|...|.:|..|
 Worm    66 -------YAGAAPTIKSCGNMTFSSNEEACLHYSY----CKEQKEMTFE---RQFYGITEQFKLL 116

  Fly   225 CDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISR 289
            |:|.|.......|..||.:||.:.:|...|..||...::....:..:..:.:::|.||..|.|.|
 Worm   117 CEDAKLEKLGTSIQMLGVMLGCVVFGQIGDQYGRKTPMMFCLCMCFIFGIMSALSADFKKFTIFR 181

  Fly   290 FLVGASYDTCF------TMVYILVLEYVGPKYRTLVANLSLALFYSPFTMVMPWIALSAGNWRRF 348
            .::      ||      |:..:.::|.:..:.|..::.|   :.|||..:::..:|.....|.|.
 Worm   182 TIL------CFFNGGQSTISVVYMIENIPKRTRGYISTL---ISYSPNVILLGILAFFFQQWDRL 237

  Fly   349 S---SFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASCT 410
            :   ||.::|.:: |.:|  |.||.|||:..|:|..|.::...:.:.:....:|   .|.|....
 Worm   238 ALVISFLTVPAII-MLAF--LHESPRWLMQKGQISHAKKVFLAIEKFDGVPAAK---SLNETELE 296

  Fly   411 QFYKEELD----------GRDFTVLSIFKRKRMARYMILMILIWMSISLVYDGHVRAASVLDSEN 465
            .|.:.|.|          |:..:...:||.|.:.....::...:.:.:|:              |
 Worm   297 NFLENEHDKQVADGNTEVGKQHSFWHLFKTKEIMTGTFVIAFTFFATTLI--------------N 347

  Fly   466 IFLFFTI-ACATELPGNILVILTL---------------DRAGRRWC----------------SF 498
            ..:.|.: |.|..:..|.::|..|               ::..|:.|                :|
 Worm   348 YSIMFNLGAVAGSIYMNSILIGLLRYSFSLFSGLLDYKFEKFDRKMCHGICSVVTISIIVAIIAF 412

  Fly   499 FYTSLSGVFSLLGASFQNRANMRMSALAGRFFSNICYNIGLQWAAEILPTVVRAQGVAFIHTMGF 563
            ..|..:..||:|         :|:..|.....::....:....:.|::||.:|:...:.......
 Worm   413 CLTDTTATFSVL---------IRIGVLLSCAMTSQAIIVASIASNELMPTAIRSISYSTAQLCSR 468

  Fly   564 VAMLMSPPVVYLSKKSLSSTL-------IVLGALGIFGGLLALFL-PETLNHELPE 611
            ..::.:|.|.:|   :|.:.:       .:|.|:|:...:...|| |||.|..|.:
 Worm   469 FGIVFAPHVFHL---NLYTGIDFPVLPYAILLAIGLADFIFFRFLIPETKNKPLED 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 112/569 (20%)
MFS 231..602 CDD:119392 81/429 (19%)
F17C11.12NP_505789.1 2A0119 <109..521 CDD:273328 92/452 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.