DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10486 and oct-1

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:537 Identity:152/537 - (28%)
Similarity:256/537 - (47%) Gaps:26/537 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DFDDLLPMIGQFGRFQIRLFLFMI--PFCFITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRK 157
            |||.:|..:|.:|.:|| :|.|:|  |....:||......|:...|| :.|::||        .|
 Worm    25 DFDFVLEQVGNYGTYQI-VFFFIICLPTSLPSAFSAFNIPFVVGNPP-HTCHIPE--------GK 79

  Fly   158 ELSIPKEKDGSYSRCRMYNTNYTKIHFAENPSAYINT---SLPTIPCKKGYVFEQEGRAFESATM 219
            |...|...|.....|:.||.....: |....||.::|   .:..:||:.|:.:: .....:|...
 Worm    80 EYLRPLTNDTQILSCKQYNETQINV-FRAFTSAPVDTYSDRISLVPCQNGWDYD-NSTYLDSLVT 142

  Fly   220 EFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFT 284
            ||..:||...:...:...|::||.:|...:|:.||..||..:......:.:|...|:|.:.|..:
 Worm   143 EFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSFAKDIES 207

  Fly   285 FAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLSLALFYSPFTMVMPWIALSAGNWRRFS 349
            |.|.||..|.::...|.:.:|:.:|::|...| :.:.|..:||:.....::..:|:....||:.:
 Worm   208 FIILRFFTGLAFPALFQIPFIICMEFMGNSGR-IFSGLMTSLFFGAAMALLGVVAMFIRRWRQLT 271

  Fly   350 SFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVN-KKQVS-KEILDLFEASCTQF 412
            .|.:.|....:..:..||||.||.||||:...|.:.||.:.::| |..|. .|::|..: :....
 Worm   272 FFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMK-NHQNA 335

  Fly   413 YKEELDGRDFTVLSIFKRKRMARYMILMILIWMSISLVYDGHVRAASVLDSENIFLFFTIACATE 477
            .:|:...|...|..:||...:.|..:::..||:..:::|:|.....|.|..:: :..|.|..|.|
 Worm   336 AEEKETKRSHNVTDLFKTPNLRRKTLIVTYIWVMNAIIYNGLTLNVSNLPVDD-YWSFIINGAVE 399

  Fly   478 LPGNILVILTLDRAGRRWCSFFYTSLSGVFSLLGASFQNRANMRMSALA---GRFFSNICYNIGL 539
            |||..:|...|..|||||.......:.|: ..:.|.|.......:.|.|   |:|.....:.:..
 Worm   400 LPGYFVVWPLLQCAGRRWTLAATMIVCGI-GCVSAMFMPDGYPWLVASASFIGKFGVGSGFAVIY 463

  Fly   540 QWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGALGIFGGLLALFLPET 604
            .:|.|:.||||||.|:.....:....:|::|.:|.|.|......|:::|.:.:..|:|..|||||
 Worm   464 IFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLLIMGLMALSAGILTFFLPET 528

  Fly   605 LNHELPETLSDGAQFGK 621
            |...||.|:.|...|||
 Worm   529 LGAPLPMTIEDAENFGK 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 143/517 (28%)
MFS 231..602 CDD:119392 101/375 (27%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 143/517 (28%)
MFS 134..526 CDD:119392 106/395 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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