DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and svopl

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_017948082.2 Gene:svopl / 100491296 XenbaseID:XB-GENE-994336 Length:492 Species:Xenopus tropicalis


Alignment Length:614 Identity:130/614 - (21%)
Similarity:222/614 - (36%) Gaps:178/614 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 IQAGDSLEKVKVTYVEPDDEESSHGFFWGKKKSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQI 111
            ||..::|..:.:..::|...|:..|             .:::..:|.::      .|| ||||.|
 Frog     6 IQYRNTLNTITLEELKPQSNEAPKG-------------HKTYTVEDAVE------TIG-FGRFHI 50

  Fly   112 RLFLFMIPFCFITAFVYLGQIFMCLTPPKYYCYVPELLHTPVELRKELSIPKEKDGSYSRCRMYN 176
            .|||.|            |.                   |.:....|:.:               
 Frog    51 MLFLIM------------GS-------------------TGIAEAMEIML--------------- 69

  Fly   177 TNYTKIHFAENPSAYINTSLPTIPCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLG 241
                                               .|..|:::...|..:..:.|....::|| |
 Frog    70 -----------------------------------LAIVSSSIRCEWHLEGWQVALVTMMVFF-G 98

  Fly   242 SILGGLAYGHFADHCGRVAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYIL 306
            .::..:..|..||..||:..|..|.......||.||.:..:..|...|.:||... :......|:
 Frog    99 YMIFSIVLGLLADRYGRLKILTISFMWGAFFSLLTSFAPSYIWFVFLRCMVGCGV-SGHAQGLII 162

  Fly   307 VLEYVGPKYRTLVANLSLALFY---SPFTMVMPWIALSAGNWRRFSSFTSLPIVLAMFSFCLLPE 368
            ..|::..|:|..:..|| .||:   |...:.:..:.:....||....|.|:|.::.:..|..:||
 Frog   163 KTEFLPKKFRGYMLPLS-QLFWLTGSLLIIGLGSVLIPTLGWRWLIRFASIPGIILILVFKFIPE 226

  Fly   369 SARWLVSVGEIDKALEILKNVIEVNKKQVSKEILDLFEASCTQFYKEELDGRDFTVLSIFKRKRM 433
            |||:.||||:...|::.|:.:..:|...:.:..:           ||....:..:|..:|.||.:
 Frog   227 SARYHVSVGKDQAAMDTLRWIANINCSAMPEGTI-----------KEPKAEKTGSVCDLFDRKYL 280

  Fly   434 ARYMILMILIWMSISLVYDGHVRAASVLDSENI-------------------------------F 467
             |..:.:.:||:.||..|.|.:.|:|.|...|:                               :
 Frog   281 -RTSLQIWVIWLGISFAYYGAILASSELLERNLLCGSGQSDAIERDMPEESKSPCHCNMLSPSDY 344

  Fly   468 LFFTIACATELPGNILVILTLDRAGRRWCSFFYTSLSGVFSLLGASFQNRANMRMSALAGRFFSN 532
            ....|:...|:..|...||.::..||||......:.:|:|.||       .|:.||: :|.....
 Frog   345 TTMLISTVGEIALNPFNILGINFLGRRWTLGITMATTGIFFLL-------LNICMSS-SGLIAVL 401

  Fly   533 IC--------YNIGLQWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTLIVLGA 589
            .|        :|....:.||:.|||:||.|:.   |.|.:..:.:....::|:..||  :.|.||
 Frog   402 FCLRALVSANFNTVYIYTAEVYPTVMRAMGMG---TSGSICRIGAMAAPFISQVLLS--VSVTGA 461

  Fly   590 LGIFG------GLLALFLP-ETLNHELPE 611
            ..:|.      .|.|..|| ||....|.:
 Frog   462 FCLFASVCFVCALSAFTLPIETRGRALQQ 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 122/557 (22%)
MFS 231..602 CDD:119392 101/418 (24%)
svoplXP_017948082.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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