DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and slc22a20p.1

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_004913725.1 Gene:slc22a20p.1 / 100489586 XenbaseID:XB-GENE-6463910 Length:572 Species:Xenopus tropicalis


Alignment Length:621 Identity:161/621 - (25%)
Similarity:261/621 - (42%) Gaps:99/621 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 FDDLLPMIGQFGRFQ-IRLFLFMIPFCFITAFVYLGQIFMCLTPPKYYCYVPEL---------LH 150
            |:|||..:|..|||| |...:.:||..|:....:| |.|.... |.:.|:||.|         .|
 Frog     3 FNDLLLSVGGLGRFQIIHTTMLLIPMLFMGCHNFL-QNFSAAV-PAHRCWVPSLDNNTMGYDQDH 65

  Fly   151 TPVELRKELSIPKEKDGSYSRCRMYN-------TNYTKIHFAENPSAYINTSLPTIPCKKGYVFE 208
            .|.      .||.::......|..|.       ||.|..:..|             ||:.|:|::
 Frog    66 LPA------FIPMDESEKPLSCLRYRKALHSMWTNGTSTNHTE-------------PCEDGWVYD 111

  Fly   209 QEGRAFESATM-EFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFADHCGRVAALVSSCFLALVG 272
            :..  |.|..: |:..:|...|....||.|:..|.::|.:..|..:|..||.|.|:.|..:..|.
 Frog   112 KSD--FSSTIVTEWDLVCKLRKMRQIAQSIYMAGVLVGAVLLGGLSDRLGRRALLIGSNLVMAVC 174

  Fly   273 SLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRTLVANLSLALFYSPFT---MV 334
            ....:...:|.|:...|.|.|.::.........|:||:..||.||::.    .||.:.||   ::
 Frog   175 GTCAAFLPNFITYCTFRCLCGIAFSGITLNTNSLILEWTPPKGRTIMG----TLFAAGFTCGQIL 235

  Fly   335 MPWIALSAGNWRRFSSFTSLPIVLAMFSFCLLPESARWLVSVGEIDKALEILKNVIEVNKKQVSK 399
            :..:|.....||......|.|.........|:|||||||:..|...:||:.|:.|..:|.|:  :
 Frog   236 LAALAYGIREWRWLQFAVSAPFYFFFLYSWLVPESARWLILKGRSHEALKALQRVAIINGKR--E 298

  Fly   400 EILDLFEASCTQFYKEELD--GRDFTVLSIFKRKRMARYMILMILIWMSISLVYDGHVRAASVLD 462
            |...|.|.......:.||:  .|..::..:|:...|.:..|.::::|.|..:.:.|     ..:|
 Frog   299 EGQKLSEMILISHMQSELNQVKRPHSLFDLFRTPGMRKVTICLMMVWFSSGVAFYG-----LGMD 358

  Fly   463 SEN----IFLF-FTIACATELPGNILVILTLDRAGRRWCSFFYTSLSGVFSLLGASF--QNRANM 520
            .:|    |||. ||.. |.::|..::..|.:...|||........|||| :||..:|  |....:
 Frog   359 LQNFGISIFLLQFTFG-AIDMPAKVVAALLMTYMGRRVTQATVLILSGV-ALLTNAFIPQGMKIL 421

  Fly   521 RM-SALAGRFFSNICYNIGLQWAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVVYLSKKSLSSTL 584
            || .|:.|:......:.....::.|:.|||:|..|:..:..|..|..:::|.|:.|.:.|.....
 Frog   422 RMVLAVFGKGCMAASFACAYLFSGELFPTVIRQTGMGVVAMMARVGSVVAPLVLLLWEISPILPS 486

  Fly   585 IVLGALGIFGGLLALFLPETLNHELPETLSDGAQFGKNQRIWHMPCCGPGSRKSHPRHNWHQGSS 649
            .:.|...|..|..|.||.||.|.:|||::.:                  ...:|..:|      :
 Frog   487 AIYGIAAIIAGGAATFLMETNNQQLPESVEE------------------VEARSQGKH------T 527

  Fly   650 LRTLSKDEF-----RSSKMYRKTKY---RFESHPSP 677
            |:.:.|:|.     .|..|..|.:.   :.:||.:|
 Frog   528 LKKVLKEEVPLNQCESQNMAPKEEMPLNQSQSHSAP 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 145/538 (27%)
MFS 231..602 CDD:119392 103/383 (27%)
slc22a20p.1XP_004913725.1 MFS 101..485 CDD:391944 108/411 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.