DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10486 and sv2bb

DIOPT Version :9

Sequence 1:NP_647998.2 Gene:CG10486 / 38664 FlyBaseID:FBgn0035647 Length:706 Species:Drosophila melanogaster
Sequence 2:XP_005161575.1 Gene:sv2bb / 100006427 ZFINID:ZDB-GENE-030131-2789 Length:687 Species:Danio rerio


Alignment Length:725 Identity:149/725 - (20%)
Similarity:230/725 - (31%) Gaps:293/725 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PDDEESSHGFFWGKKKSETSLPRRSWETDDYIDFDDLLPMIGQFGRFQIRLFLFMIPFCFITAFV 127
            ||:.:::......|.::.|.......|..:  .::|::...|. |:||            .|.||
Zfish    67 PDEVKAARRAARAKARTPTDTVSELEELAE--QYEDIMEDCGH-GKFQ------------WTLFV 116

  Fly   128 YLGQIFMCLTPPKYYCYVPELLHTPVELRKELSIPK-EKDGSYSRCRMYNTNYTKIHFAENPSAY 191
            .||   :.|......|:|..|:           :|. |||...|.                    
Zfish   117 VLG---LALMADSVECFVVALV-----------LPSAEKDMCLSH-------------------- 147

  Fly   192 INTSLPTIPCKKGYVFEQEGRAFESATMEFGWLCDDDKYATYAQIIFFLGSILGGLAYGHFADHC 256
                     .:||.:                            .:|.|||.:.|...:|..||..
Zfish   148 ---------AEKGML----------------------------GLIVFLGMMFGAFIWGGLADKV 175

  Fly   257 GR----VAALVSSCFLALVGSLATSMSTDFFTFAISRFLVGASYDTCFTMVYILVLEYVGPKYRT 317
            ||    :..|..:|..|...|.|....  ||.|  .|...|........:||....|::....|.
Zfish   176 GRRKCLIIVLAMNCISAFFSSFAQGYG--FFLF--FRLFSGIGIGGSVPIVYSYFSEFLQMDKRG 236

  Fly   318 LVANLS-LALF------YSPFTM--VMP---WIALSAG------NWRRFSSFTSLPIVLAMFSFC 364
              .:|| |.:|      |:.||.  ::|   | ..|.|      :||.|....:||.:.|.....
Zfish   237 --EHLSWLCMFWMMGGIYASFTAWGIIPRYGW-GFSMGTEFQFHSWRVFVLVCALPAIAAFVGLM 298

  Fly   365 LLPESARWLVSVGEIDKALEILKNVIEVN---KKQVSK---------------EILDLFEASCTQ 411
            .:|||.|:|:...:.|:|..|||.|.:.|   |.|..|               |.:::..|:.|.
Zfish   299 FMPESPRFLLENAKHDEAWMILKQVHDTNWRAKGQPEKVFTVTQIRTPKTQEDEFIEIQTATGTA 363

  Fly   412 FYKEELDGRDFT------VLSIFKRK-RMARYMILMILIWMSISLVYDG---------------- 453
            |.:..:.....|      |||:|.|: |:|  .:||.:||.:::..|.|                
Zfish   364 FQRWVVRTLTLTKLVIKNVLSLFGRELRLA--TLLMAIIWFTMAFSYYGLSVWFPDMIKHLQHEE 426

  Fly   454 --------------------------------------HVRAASVLDSENIFL--FFT------- 471
                                                  ::...||...:::|:  ||.       
Zfish   427 YESKVKVFHREKVEQFHFNFSLENQVHKEGEYINDKFINIEMKSVKFEDSLFVDCFFENVRSTET 491

  Fly   472 ----------------------IACATE----------------------------------LPG 480
                                  |.|..|                                  |||
Zfish   492 MFENCTIRSTVFYDTDLYEEKFIDCTMENVTFLHNKKGCHLDYEEDNDVLIYLVSFLGSLAVLPG 556

  Fly   481 NILVILTLDRAGR-----------RWCSFFYTSLSGVFSLLGASFQNRANMRMSALAGRFF--SN 532
            ||:..|.:|:.||           ..|:||          |..||...|.:....|   |:  |.
Zfish   557 NIISALFMDKIGRIKIIGGSMLVSAGCTFF----------LFLSFSQAAIIAWQCL---FYGVSV 608

  Fly   533 ICYNIGLQ-WAAEILPTVVRAQGVAFIHTMGFVAMLMSPPVV--YLSKKSLSSTLIVLGALGIFG 594
            ..:| |:| ...|:.|...||....|::.|..:|.::...:.  ::....:...|:...|| :.|
Zfish   609 AAWN-GIQVITVELYPASKRATAFGFLNAMCKLAAILGSSIFASFIGITKVIPILLSFAAL-VSG 671

  Fly   595 GLLALFLPET 604
            |:|||.||||
Zfish   672 GVLALKLPET 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10486NP_647998.2 2A0119 104..612 CDD:273328 143/684 (21%)
MFS 231..602 CDD:119392 119/552 (22%)
sv2bbXP_005161575.1 MFS 115..>308 CDD:119392 60/270 (22%)
Pentapeptide_4 457..532 CDD:290330 8/74 (11%)
MFS 538..>676 CDD:119392 35/152 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.