DRSC/TRiP Functional Genomics Resources

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Protein Alignment QC and yfbL

DIOPT Version :10

Sequence 1:NP_729109.1 Gene:QC / 38663 FlyBaseID:FBgn0052412 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_416774.2 Gene:yfbL / 945832 ECOCYCID:G7178 Length:323 Species:Escherichia coli


Alignment Length:361 Identity:72/361 - (19%)
Similarity:133/361 - (36%) Gaps:117/361 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVFAAAGLLLLLLP---------------PSHQQATAGNIGSQWRDDEVHFNRTLDSI--LVPRV 53
            ::||...|.:.|||               |.|..........::....|| .|:.|:|  |    
E. coli     4 IIFAFIILFVFLLPMIIFYQPWVNALPSTPRHASPEQLEKTVRYLTQTVH-PRSADNIDNL---- 63

  Fly    54 VGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDS- 117
              :|..:.::|..|.|    |.:..    .|.||:.|. .:.|:|....|.....:.:..|||| 
E. coli    64 --NRSAEYIKEVFVSS----GARVT----SQDVPITGG-PYKNIVADYGPADGPLIIIGAHYDSA 117

  Fly   118 KYFPND-----PGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEA--FKE 175
            ..:.||     |   ||.|:|...|.||..|:.|...:.|       .|:.|:.:..||.  |: 
E. coli   118 SSYENDQLTYTP---GADDNASGVAGLLELARLLHQQVPK-------TGVQLVAYASEEPPFFR- 171

  Fly   176 WTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDR-IEVLVLLDLIGARNPKFSSFYENTDGLH- 238
               :|.:..:.|.|                 :::| :::::.|::||        :|::..|.. 
E. coli   172 ---SDEMGSAVHAA-----------------SLERPVKLMIALEMIG--------YYDSAPGSQN 208

  Fly   239 --------------------------SSLVQIEKSLRTAGQLEGNNNMFLSRVSG---GLVDDDH 274
                                      :::.|::.:|.::..|    :::.....|   |:...||
E. coli   209 YPYPAMSWLYPDRGDFIAVVGRIQDINAVRQVKAALLSSQDL----SVYSMNTPGFIPGIDFSDH 269

  Fly   275 RPFLDENVPVLHLVATPF--PDVWHTPRDNAANLHW 308
            ..:...::|.:.:..|.|  ...:|.|.|.|..|::
E. coli   270 LNYWQHDIPAIMITDTAFYRNKQYHLPGDTADRLNY 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QCNP_729109.1 M28_QC_like 21..325 CDD:349876 65/331 (20%)
yfbLNP_416774.2 M28_like 37..322 CDD:349893 64/328 (20%)

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