DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment QC and qpct

DIOPT Version :9

Sequence 1:NP_729109.1 Gene:QC / 38663 FlyBaseID:FBgn0052412 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_009291517.1 Gene:qpct / 795685 ZFINID:ZDB-GENE-130827-1 Length:362 Species:Danio rerio


Alignment Length:363 Identity:141/363 - (38%)
Similarity:201/363 - (55%) Gaps:39/363 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIGSVVFAAAGLLLLL-----LP-----PSHQQATAG-----------NIGSQWRDDEVHFNRT 44
            |:..|.:.|..|:|..|     :|     ..|:..|..           ::...|:.|       
Zfish     4 MSFSSRLLALIGILTTLTSCDTIPWQEKKLKHEATTLNSSELSSIVAHTDLDRMWQKD------- 61

  Fly    45 LDSILVPRVVGSRGHQQVREYLVQSLNGL--GFQTEVDEFKQRVPVFGELTFANVVGTINPQAQN 107
            |.|:||.|..||.|.|||::::..:|:.|  |:....|.|....| :|:|.|.|::.|:||.|:.
Zfish    62 LKSMLVVRYPGSAGSQQVQQHIKSTLSLLKAGWDVTEDSFYANTP-YGQLPFTNIIATLNPTAKR 125

  Fly   108 FLALACHYDSKYFP---NDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDG 169
            .|.|||||||||:|   :...|:||.||||||:::|..::.....|:....:.||:.|.|:||||
Zfish   126 QLVLACHYDSKYYPPQWDGREFLGAIDSAVPCSMILELSRAQDDELKTLKNSGSDLSLQLLFFDG 190

  Fly   170 EEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENT 234
            |||..:||..||:|||:|||.|:|:.....:|....: :|.|::.|||||||..||:|.:.:.:|
Zfish   191 EEALYQWTSEDSLYGSRHLAHKMATASHPPEATNTSQ-LDSIDLFVLLDLIGGPNPRFGNQFSST 254

  Fly   235 DGLHSSLVQIEKSLRTAGQLEGNNN---MFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFPDVW 296
            ....|.|..||:.|...||||.:.|   .|...:..||:.|||.|||:..|.:|||::||||.||
Zfish   255 TRWLSRLRNIERRLHALGQLENHPNEVQYFWPGLHVGLILDDHIPFLNRGVRILHLISTPFPAVW 319

  Fly   297 HTPRDNAANLHWPSIRNFNRVFRNFVYQYLKRHTSPVN 334
            ||..||..||...||.|.|: .:.||.:||.: .||.|
Zfish   320 HTFDDNEENLDQTSISNLNKXLQVFVLEYLNK-KSPEN 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QCNP_729109.1 M28_QC_like 36..325 CDD:193501 126/296 (43%)
qpctXP_009291517.1 M28_QC_like 49..348 CDD:193501 127/307 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577748
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3946
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55920
OrthoDB 1 1.010 - - D1257754at2759
OrthoFinder 1 1.000 - - FOG0001509
OrthoInspector 1 1.000 - - mtm6584
orthoMCL 1 0.900 - - OOG6_102560
Panther 1 1.100 - - O PTHR12283
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1074
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1211.720

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