DRSC/TRiP Functional Genomics Resources

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Protein Alignment QC and Qpct

DIOPT Version :10

Sequence 1:NP_729109.1 Gene:QC / 38663 FlyBaseID:FBgn0052412 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_081731.1 Gene:Qpct / 70536 MGIID:1917786 Length:362 Species:Mus musculus


Alignment Length:352 Identity:144/352 - (40%)
Similarity:201/352 - (57%) Gaps:42/352 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLLLLPPSHQQATAGN---IGSQWRDDEVH-----------------------FNRTLDSILVP 51
            |.||||..:....||||   :.:.|..::.|                       :...|..:|:.
Mouse    13 LHLLLLQATVLSLTAGNLSLVSAAWTQEKNHHQPAHLNSSSLQQVAEGTSISEMWQNDLRPLLIE 77

  Fly    52 RVVGSRGHQQVREYLVQSLNGLGFQ--TEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACH 114
            |..||.|....|::::|.:..|..:  .|||.|..|.| :|..:|:|::.|:||:|:..|.||||
Mouse    78 RYPGSPGSYSARQHIMQRIQRLQAEWVVEVDTFLSRTP-YGYRSFSNIISTLNPEAKRHLVLACH 141

  Fly   115 YDSKYFP--NDPGFVGATDSAVPCAILLNTAKTLGAYLQ--KEFR-NRSDVGLMLIFFDGEEAFK 174
            |||||||  :...||||||||||||::|..|:.|...|.  |:.. ::.|:.|.||||||||||.
Mouse   142 YDSKYFPRWDSRVFVGATDSAVPCAMMLELARALDKKLHSLKDVSGSKPDLSLRLIFFDGEEAFH 206

  Fly   175 EWTDADSVYGSKHLAAKLASK--RSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGL 237
            .|:..||:|||:|||.|:||.  ..||:   ....:|.:::|||||||||.||.|.:|:..|...
Mouse   207 HWSPQDSLYGSRHLAQKMASSPHPPGSR---GTNQLDGMDLLVLLDLIGAANPTFPNFFPKTTRW 268

  Fly   238 HSSLVQIEKSLRTAGQLEGNN---NMFLSRVSGGLVDDDHRPFLDENVPVLHLVATPFPDVWHTP 299
            .:.|..|||.|...|.|:.::   ..|.:...|.::.|||.|||.:.||||||:|:|||:||||.
Mouse   269 FNRLQAIEKELYELGLLKDHSLERKYFQNFGYGNIIQDDHIPFLRKGVPVLHLIASPFPEVWHTM 333

  Fly   300 RDNAANLHWPSIRNFNRVFRNFVYQYL 326
            .||..|||..:|.|.|::.:.||.:||
Mouse   334 DDNEENLHASTIDNLNKIIQVFVLEYL 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QCNP_729109.1 M28_QC_like 21..325 CDD:349876 137/341 (40%)
QpctNP_081731.1 M28_QC_like 54..359 CDD:349876 131/308 (43%)

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