DRSC/TRiP Functional Genomics Resources

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Protein Alignment QC and qpct

DIOPT Version :10

Sequence 1:NP_729109.1 Gene:QC / 38663 FlyBaseID:FBgn0052412 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001017245.1 Gene:qpct / 549999 XenbaseID:XB-GENE-953343 Length:359 Species:Xenopus tropicalis


Alignment Length:294 Identity:127/294 - (43%)
Similarity:179/294 - (60%) Gaps:10/294 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 FNRTLDSILVPRVVGSRGHQQVREYLVQSLNGL--GFQTEVDEFKQRVPVFGELTFANVVGTINP 103
            |...|..:|..|..||.|:..||:::.|.|..|  |:.||.|.|:...| :|.:||:|::.|:||
 Frog    66 FQTDLKPMLTERYAGSPGNYAVRQHIKQRLQSLQAGWVTEEDTFEAPTP-YGYVTFSNIISTLNP 129

  Fly   104 QAQNFLALACHYDSKYF-PNDPG--FVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLI 165
            .|:..|.|||||||||| |...|  ||||.|:|||||::|..|:.|.:.|:|:..::.|:.|.||
 Frog   130 SAKRHLVLACHYDSKYFSPQWDGRVFVGAIDAAVPCAMMLELARALDSSLKKKLNSKLDLSLQLI 194

  Fly   166 FFDGEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSF 230
            ||||||||:.|:..||:|||||||.|:.:......|: ....:..|::.:||||||..||.|.::
 Frog   195 FFDGEEAFQRWSSYDSLYGSKHLAQKMETISHPPNAE-NTNQLHGIDLFILLDLIGTANPVFPNY 258

  Fly   231 YENTDGLHSSLVQIEKSLRTAGQLEGNNN---MFLSRVSGGLVDDDHRPFLDENVPVLHLVATPF 292
            ::||....:.|..||:.|.....|:.:.:   .|.|......|.|||.|||...||:|||:.:||
 Frog   259 FQNTARWFNRLQSIERRLHGLNLLKNHPSEVQYFQSGFRARPVLDDHVPFLQRGVPILHLIPSPF 323

  Fly   293 PDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQYL 326
            |:||||..||..||...:|.|.|::.:.||.:||
 Frog   324 PEVWHTMEDNEENLDSATIENLNKILQVFVLEYL 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QCNP_729109.1 M28_QC_like 21..325 CDD:349876 125/291 (43%)
qpctNP_001017245.1 M28_QC_like 51..356 CDD:349876 125/291 (43%)

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