DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment QC and CG32413

DIOPT Version :10

Sequence 1:NP_729109.1 Gene:QC / 38663 FlyBaseID:FBgn0052412 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_001097521.3 Gene:CG32413 / 318018 FlyBaseID:FBgn0052413 Length:332 Species:Drosophila melanogaster


Alignment Length:346 Identity:122/346 - (35%)
Similarity:181/346 - (52%) Gaps:42/346 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVFAAAGLLLLLLPPSHQQATAGNIGSQWRDDEVHFNRTLDSILVPRVVGSRGHQQVREYLVQSL 70
            |||.|..|..::..|..          ::.|||.|||.||..:|.||.|||:||.:|::::...|
  Fly    14 VVFKAMFLRWVIEKPPF----------KFDDDEEHFNATLAKLLKPRSVGSKGHAEVQDFIETEL 68

  Fly    71 NGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYFPN--DPGFVGATDSA 133
            ..|.|.|..::|:|.|.:      .|:||..|.:|:.:|.|.||||||...|  ...|:.|.:.|
  Fly    69 KRLDFITLKNDFQQGVNI------TNLVGFWNMRAKFYLMLTCHYDSKKPENVTTDEFLAAAEGA 127

  Fly   134 VPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFDGEEAF-KEWTDADSVYGSKHLAAKLASKRS 197
            |.||||||.||||..:|...:..:..|||..|||||..:. .:..|.:.:.|:.|..        
  Fly   128 VSCAILLNVAKTLRQFLIDRWSEKKSVGLAFIFFDGHNSLSSDPYDENELLGATHFI-------- 184

  Fly   198 GSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSLRTAGQLEGNNNMFL 262
              ..:..|  :..:.|.|.|..|||.|..|.||:|.|:.||:.:..||:.||.:|:|:..:.:|.
  Fly   185 --DEEFIP--LRDMAVAVTLSYIGAPNQTFLSFFEVTNDLHNLIADIEQDLRKSGELDDCHVLFQ 245

  Fly   263 SRV--SGGLVDDDHRPFLDENVPVLHLVATPFPDVWHTPRDNAANLHWPSIRNFNRVFRNFVYQY 325
            .:.  ...|: |||..|.:::|||:|:....||:|.:||.||..|||:|:|||..::.|.||:.:
  Fly   246 KKTHYDKDLL-DDHIVFDEQDVPVIHVSPHEFPNVLYTPADNVENLHYPTIRNMIKIIRCFVHDF 309

  Fly   326 LK--------RHTSPVNLRFY 338
            .:        |....:|..||
  Fly   310 YEKWQYFMKWRQAFAINYDFY 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
QCNP_729109.1 M28_QC_like 21..325 CDD:349876 112/308 (36%)
CG32413NP_001097521.3 M28_QC_like 19..309 CDD:349876 114/318 (36%)

Return to query results.
Submit another query.