DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and shiA

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_416488.1 Gene:shiA / 946495 ECOCYCID:G7067 Length:438 Species:Escherichia coli


Alignment Length:188 Identity:43/188 - (22%)
Similarity:78/188 - (41%) Gaps:39/188 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 IVTW-------MTVALAYDAHV--RVVEILDT-DIFITFSLSSLVEIPAGIVPMLLLDRIGRKPM 403
            :|.|       :|.||.::...  :|...:.| ..|.||.:..|.....|::.....||:|||.|
E. coli    32 VVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVIFGHFGDRLGRKRM 96

  Fly   404 MSAVMLLCAASSLFVGILKGH----WNASTAAIAARFFATMAYNVGQQWASEILPTVLR------ 458
            :...:.:...::..:|||...    |.|....:..|  |...:.||.:|....|.:|..      
E. coli    97 LMLTVWMMGIATALIGILPSFSTIGWWAPILLVTLR--AIQGFAVGGEWGGAALLSVESAPKNKK 159

  Fly   459 ---------GQGLAIINIMGQMGALLSPLVLSTHRYYRP----LPMFIITLVSVIGAL 503
                     |.|:.::...| :.:|:|  :::|...:..    :| |:.::|.|:|||
E. coli   160 AFYSSGVQVGYGVGLLLSTG-LVSLIS--MMTTDEQFLSWGWRIP-FLFSIVLVLGAL 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 43/188 (23%)
shiANP_416488.1 PRK09952 1..438 CDD:182163 43/188 (23%)

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