DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5592 and ynfM

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_416113.1 Gene:ynfM / 946138 ECOCYCID:G6854 Length:417 Species:Escherichia coli


Alignment Length:401 Identity:94/401 - (23%)
Similarity:146/401 - (36%) Gaps:127/401 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 VGCLCFGFITDHSGRLP----ALFLANSCSMIGGCVSVVCKDFPCFAASRFVAGLS--------M 204
            :|.|..|.::|..||.|    ||.||:.|:::    |.:...:......|.:.|||        |
E. coli    86 IGLLFTGPLSDAIGRKPVMVTALLLASICTLL----STMMTSWHGILIMRALIGLSLSGVAAVGM 146

  Fly   205 NY-------CFVP----IYILTLENVGIKYRTLVGNLALTFFFTLGACLLPWLAYVISNWRHYAM 258
            .|       .||.    :||......|:..|.:.|  ..|.||               |||    
E. coli   147 TYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLISG--VFTDFF---------------NWR---- 190

  Fly   259 VVALPIV--FMILTSL----LAPESPSWLMSVGKVDRCIEVMKEAAKANGKIISEEVWSEMRECY 317
             :||..:  |.:.::|    :.|||..:        |...:..:....|.::    .|.:  ...
E. coli   191 -IALAAIGCFALASALMFWKILPESRHF--------RPTSLRPKTLFINFRL----HWRD--RGL 240

  Fly   318 ELKFANEQLGKQYTSLDLFKTFPRLVVLTILIVTWMTVALAYDAHV--RVVEILDTDIFITFSLS 380
            .|.||     :.:..:..|.|....:...:::..|         ||  .||.:|.. .::|.:.|
E. coli   241 PLLFA-----EGFLLMGSFVTLFNYIGYRLMLSPW---------HVSQAVVGLLSL-AYLTGTWS 290

  Fly   381 SLVEIP-AGIVPMLLLDRIGRKPMM---SAVMLLCAASSLFVGILKGHW--NASTAAIAARFFAT 439
            |    | ||    .:..|.||.|:|   :.|||.....:||..:    |  .|.....:|.||| 
E. coli   291 S----PKAG----TMTTRYGRGPVMLFSTGVMLFGLLMTLFSSL----WLIFAGMLLFSAGFFA- 342

  Fly   440 MAYNVGQQWASEILPTVLRGQGLAI----------INIMGQMGALLSPLVLSTHRY-YRPLPMFI 493
             |::|...|   |.|...|.:|.|.          .:|.|.:|.:.      .|.| :..:..| 
E. coli   343 -AHSVASSW---IGPRAKRAKGQASSLYLFSYYLGSSIAGTLGGVF------WHNYGWNGVGAF- 396

  Fly   494 ITLVSVIGALI 504
            |.|:.||..|:
E. coli   397 IALMLVIALLV 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 94/401 (23%)
ynfMNP_416113.1 MFS_NepI_like 38..409 CDD:340882 94/401 (23%)

Return to query results.
Submit another query.