DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5592 and mdfA

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_415363.1 Gene:mdfA / 945448 ECOCYCID:G6440 Length:410 Species:Escherichia coli


Alignment Length:348 Identity:82/348 - (23%)
Similarity:136/348 - (39%) Gaps:90/348 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   137 DFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSV-VCKDFPCFAASRFVA 200
            |:...|:..|..|.:......|.::|..||.|.: ||.....|..|::: :.::...|...||:.
E. coli    52 DWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVM-LAGVVWFIVTCLAILLAQNIEQFTLLRFLQ 115

  Fly   201 GLSMNYCFVPI--YILTLEN----VGIKYRTLVGNLALTFFFTLGACLLPWLAYVI-SNWRHYAM 258
            |:|:  ||:..  |....|:    |.||...|:.|:||         :.|.|..:: :.|.|   
E. coli   116 GISL--CFIGAVGYAAIQESFEEAVCIKITALMANVAL---------IAPLLGPLVGAAWIH--- 166

  Fly   259 VVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKIISEEVWSEMRECYEL---- 319
            |:....:|::..:|.|       :|...:.|   .|.|.|...|:.:|   ..|:...|:|    
E. coli   167 VLPWEGMFVLFAALAA-------ISFFGLQR---AMPETATRIGEKLS---LKELGRDYKLVLKN 218

  Fly   320 -KFANEQLGKQYTSLDLFKTFPRLVVLTILIVTWMTVALAYDAHVRVVEILDTDIFITFSLSS-- 381
             :|....|...:.||.|                     ||:.|...::      |.....|||  
E. coli   219 GRFVAGALALGFVSLPL---------------------LAWIAQSPII------IITGEQLSSYE 256

  Fly   382 --LVEIP---AGIVPMLLLDRI-GRKPMMSAVMLLCAASSLFVGILKGHWNASTAAIAARFFATM 440
              |:::|   |.|...|||.|: .|:.:.|  :::.....:.:|:|        .|.||...::.
E. coli   257 YGLLQVPIFGALIAGNLLLARLTSRRTVRS--LIIMGGWPIMIGLL--------VAAAATVISSH 311

  Fly   441 AYNVGQQWASEILPTVLRGQGLA 463
            ||    .|.:..|.....|.|||
E. coli   312 AY----LWMTAGLSIYAFGIGLA 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 82/348 (24%)
mdfANP_415363.1 PRK15402 7..410 CDD:185300 82/348 (24%)

Return to query results.
Submit another query.