DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and Svopl

DIOPT Version :9

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:457 Identity:96/457 - (21%)
Similarity:174/457 - (38%) Gaps:112/457 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 WVCDKRDFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDFPCF-- 193
            |..:.......:.:|:| |.:|..:.||.:.|..||...|.|:   .:.|...|::....|.:  
  Rat    31 WQLENWQVAFVTTMVFF-GYMVSSILFGLLADRYGRWKILLLS---FLWGAYFSLLTSFSPSYIW 91

  Fly   194 ----------AASRFVAGLSMNYCFVPI----YILTLENVGIKYRTLVGNLALTFFFTLGACLLP 244
                      ..|....||.:...|:|.    |:|.|..|               |:..|:.|:.
  Rat    92 FVFLRTMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQV---------------FWLAGSLLII 141

  Fly   245 WLAYVI---SNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKIIS 306
            .:|.|:   ..||....:.::|.:.:|:.....|||..:.:|.|.....::.::..||.|..::.
  Rat   142 SMASVVIPTIGWRWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAALDTLESIAKMNRSVMP 206

  Fly   307 EEVWSEMRECYELKFANEQLGKQYTSLDLFKTFPRLVVLTILIVTWMTVALAYDAHVRV-VEILD 370
            |.           :.....|.|:....||.::......|.|.|: |:.::.||...:.. .|:|:
  Rat   207 EG-----------RLVEPILEKRGRFADLLESKYLRTTLQIWII-WLGISFAYYGVILASAELLE 259

  Fly   371 TDI-----------------------------------FITFSLSSLVEIPAGIVPMLLLDRIGR 400
            .|:                                   :.|..:|:|.||....:.:|.::.:||
  Rat   260 RDLVCGSKSESEPEVVENMGDAEEGRSPCYCHMFAPSDYRTMIISTLGEIALNPLNILGINFLGR 324

  Fly   401 KPMMSAVM----------LLCAASSLFVGILKGHWNASTAAIAARFFATMAYNVGQQWASEILPT 455
            :..:|..|          .:|.:|:..:|.|    ....|.:||.|.....|      .:|:.||
  Rat   325 RLSLSITMGCTALFFLLLNICTSSAGLIGFL----FMLRALVAANFNTIYIY------TAEVYPT 379

  Fly   456 VLRGQGLAIINIMGQMGALLSPL---VLSTHRYYRPLPMFIITLVSVIGALIILFLP-ETKGATM 516
            .:|..|:.....:.::||:::|.   ||.:..:...|.:|  :.|.|:.|:....|| ||||..:
  Rat   380 PMRALGMGTSGSLCRIGAMVAPFISQVLMSASFLGALCLF--SSVCVVCAISAFTLPIETKGRAL 442

  Fly   517 PQ 518
            .|
  Rat   443 QQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 2A0119 17..519 CDD:273328 96/457 (21%)
MFS 141..509 CDD:119392 88/435 (20%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 89/445 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347247
Domainoid 1 1.000 54 1.000 Domainoid score I10941
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.930

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