DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5592 and SLC22A

DIOPT Version :9

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_649370.1 Gene:SLC22A / 40437 FlyBaseID:FBgn0037140 Length:568 Species:Drosophila melanogaster


Alignment Length:556 Identity:143/556 - (25%)
Similarity:250/556 - (44%) Gaps:61/556 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPRDCE--KYENFLLFIGDFGPFQKRLLFWM--MPAAF--LFAFTYFGQIFMILLPKNHWCRVRE 60
            |.:|.|  ..:..|..:|.||.|| .::|.:  :|..|  :|:.||......:    .|.|.|.|
  Fly    18 PAKDSEDVTLDAILKHLGQFGRFQ-LIIFLLICLPMMFHAMFSVTYVFTAATV----THRCSVEE 77

  Fly    61 LEGLPESE----QKNRGIPKKQDGSFENCFMY---NVPYDSNATNDANQ---TRSPIPC-NNGWI 114
            .: ||.|.    ..|..|| |.....::|..|   .:|..:::.:..:.   |::...| :|.::
  Fly    78 CD-LPGSNYYEPHTNWSIP-KNGKDLDSCNRYTNSELPQWNHSVDICSADHFTKNKEACAHNEFV 140

  Fly   115 YDRKEVPYESIATEYNWVCDKR----DFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANS 175
            :...||   :|:.::...||..    ..||.:.:..|.|..:|    ||:.|..||..::.|...
  Fly   141 FRDDEV---TISNDFGIFCDDEWKLSMVGTINNLGQFFGIPIG----GFVADRYGRSFSIALGGI 198

  Fly   176 CSMIGGCVSVVCKDFPCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLALTFFFTLGA 240
            ...:.|.:......:..|....|:..::.:..:...:::.:|.||.|.|.|..:: :|.|:.:|.
  Fly   199 LGAVLGVIRSFSPSYGWFLVFEFLDNMTSSTLYSTCFVIGIELVGPKRRVLACSV-ITVFYAVGE 262

  Fly   241 CLLPWLAYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKII 305
            .||...|....:||....:...|.:.::....:.|||..||:|.||.:|...:::.||..|.:.:
  Fly   263 VLLAMSAKAFHDWRILLRITYGPSLILLAYFWILPESVRWLLSQGKEERAKNILRRAAHVNKREL 327

  Fly   306 SEEVWSEMRECYELKFANEQLGKQ-----YTSLDLFKTFPRLVVLTILIVTWMTVALAYDAHVRV 365
            .|.|..      :|..||....:|     :...:.||.|...:....|  .|:...|.|......
  Fly   328 PESVLD------KLVLANRDKLQQSSESRFPIREAFKNFKWRIANCSL--CWIVHVLVYYGLSLN 384

  Fly   366 VEILDTDIFITFSLSSLVEIPAGIVPMLLLDRIGRKPMMSAVML---LCAASSLFVG----ILKG 423
            |.:||.|.:..|:..:|||||...:|:|::||.||:..:..:||   ||...::|.|    :|: 
  Fly   385 VVLLDGDKYNNFAYIALVEIPGFFMPLLIMDRFGRRYSLCGLMLASGLCCIGTIFTGADQPVLQ- 448

  Fly   424 HWNASTAAIAARFFATMAYNVGQQWASEILPTVLRGQGLAIINIMGQMGALLSPLVLSTHRYYRP 488
                ....:..:...|.::.|...:||||.||.||...|:..::||:.|::|:|......:||..
  Fly   449 ----LVLFLVGKLTITASFQVLYFFASEIYPTNLRNSLLSFCSMMGRFGSMLAPQTPLLAKYYAN 509

  Fly   489 LPMFIITLVSVIGALIILFLPETKGATMPQTLDEAE 524
            .|..:....:::..|:.||.|||....:|.|:.||:
  Fly   510 APAMLFAGAAIVSGLLTLFFPETTNVVLPTTVQEAD 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 2A0119 17..519 CDD:273328 136/532 (26%)
MFS 141..509 CDD:119392 97/379 (26%)
SLC22ANP_649370.1 2A0119 35..540 CDD:273328 136/532 (26%)
MFS 146..530 CDD:119392 103/404 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458510
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 86 1.000 Inparanoid score I1789
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.990

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