DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and oct-2

DIOPT Version :10

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_509899.3 Gene:oct-2 / 181325 WormBaseID:WBGene00003843 Length:757 Species:Caenorhabditis elegans


Alignment Length:602 Identity:141/602 - (23%)
Similarity:240/602 - (39%) Gaps:127/602 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YENFLLFIGDFGPFQKRLLFWMMPAAFLF-------AFTYFGQIFMILLPKNHWCRV-------- 58
            :|..|..||...       :|.:....:.       |......::|:..| :|||::        
 Worm   156 FEGILQLIGGCS-------YWQIIVYLIISVQQVPHAMFNLSVVYMMYQP-DHWCKIPFFNEESF 212

  Fly    59 -RELE--------------GLPESEQKNRGIPKKQDGSFENCFMYNVPY------------DSNA 96
             .||.              ..|.:..|.|     .:...:.|..:...|            |.||
 Worm   213 SAELGYTNYTWDQVLNSTIAFPRTFNKQR-----NELHHDQCHYFERDYVHIKLSPWAQVKDMNA 272

  Fly    97 TNDANQTRSPIPCNNGWIYDRKEVPYESIATEYNWVCDKRDFGTYSVVVYFVGCIVGCLCFGFIT 161
            |...|:.:.       |.|| ..|...:|.||:|.|||......:..:.|.:|.:|||...|||:
 Worm   273 TGKINRCKE-------WEYD-TSVMDRTIVTEWNRVCDNNWSRAHVHMSYSLGYLVGCFVGGFIS 329

  Fly   162 DHSGRLPALFLANSCSMIGGCVSVVCKDFPCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTL 226
            |..||..|:......:|:.|.:....|:|..|...||:...:.....:..|:|.:|..|.|||::
 Worm   330 DRYGRKTAITGFGILTMLFGFLLTYSKEFEIFLVVRFLLAATNEAADLAAYVLCMEVTGTKYRSI 394

  Fly   227 VGNLALTFFFTLGACLLPWLAYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCI 291
            ||:| :...:..|...|..:||:..:|....::..|..:..::.....||||.||:...|..:..
 Worm   395 VGSL-IQAPWACGYAFLALIAYLTKSWTMIHLICVLLHIISLMLLYFLPESPRWLILNNKTKQAE 458

  Fly   292 EVMKEAAKANGKIISEEV----------WSEMRE---------CYELKFANEQLGKQYTSLDLFK 337
            ::::||...|...:..::          |.:..|         ..||:|.|              
 Worm   459 KIIREACHYNKSRLPSDLGLVRHAEKKKWMKHNEKPSYFHLFRSSELRFRN-------------- 509

  Fly   338 TFPRLVVLTILIVTWMTVALAYDAHVRVV--------EILDTDIFITFSLSSLVEIPAGIVPMLL 394
                    .:|.:.|:..||.|...|..:        .:.|.:.|:..:::..:|:|..:..:.|
 Worm   510 --------VVLFIVWIATALVYYGMVIALSDQSSPGRRVFDGNFFLNNAMAGAIELPTLVFCVFL 566

  Fly   395 LDRIGRKPMMSAVMLLCAASSLFV--GILKGHWNASTAAIAARFFATM----AYNVGQQWASEIL 453
            | |:|||   .:.||:...|.||:  .::..:...||.|:.....:..    ::|:...:.||:.
 Worm   567 L-RMGRK---RSQMLVLFGSGLFLLTSVVMVYRKQSTLALIFMLLSKACIQGSFNILYIFTSELN 627

  Fly   454 PTVLRGQGLAIINIMGQMGALLSPLVLSTHRYYRPL-PMFIITLVSVIGALIILFLPETKGATMP 517
            |||:|...:.|.:::.:|||..|..:........|| ||.|....|::...::|.||||:|..:|
 Worm   628 PTVVRNSAVGISSMVARMGAGASGYIAILSDVTMPLVPMTIFACFSLLAGCLVLLLPETQGLPLP 692

  Fly   518 QT-LDEAE--KRWTLRC 531
            .| ||..:  ||.|..|
 Worm   693 DTILDSVQMVKRNTKPC 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 MFS_SLC22 113..509 CDD:340875 105/429 (24%)
oct-2NP_509899.3 MFS_SLC22 281..673 CDD:340875 103/426 (24%)

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