DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5592 and oct-1

DIOPT Version :9

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_492617.4 Gene:oct-1 / 172841 WormBaseID:WBGene00003842 Length:585 Species:Caenorhabditis elegans


Alignment Length:541 Identity:156/541 - (28%)
Similarity:263/541 - (48%) Gaps:40/541 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PPRDCEKYENFLLFIGDFGPFQKRLLFWM---MPAAFLFAFTYFGQIFMILLPKNHWCRVRELEG 63
            ||    .::..|..:|::|.:|  ::|:.   :|.:...||:.|...|::..|. |.|.:     
 Worm    23 PP----DFDFVLEQVGNYGTYQ--IVFFFIICLPTSLPSAFSAFNIPFVVGNPP-HTCHI----- 75

  Fly    64 LPESEQKNRGIPKKQDGSFENCFMYNV-------PYDSNATNDANQTRSPIPCNNGWIYDRKEVP 121
             ||.::..|  |...|....:|..||.       .:.|...:..:...|.:||.|||.||.... 
 Worm    76 -PEGKEYLR--PLTNDTQILSCKQYNETQINVFRAFTSAPVDTYSDRISLVPCQNGWDYDNSTY- 136

  Fly   122 YESIATEYNWVCDKRDFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVV 186
            .:|:.||:|.|||::.:...|...::||..:|...||::.|..||..:.|:..:..::.|..|..
 Worm   137 LDSLVTEFNLVCDQQAWIEISTTSFYVGSFIGNCLFGYVADKFGRRRSFFVILTVLIVCGTASSF 201

  Fly   187 CKDFPCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLALTFFFTLGACLLPWLAYVIS 251
            .||...|...||..||:....|...:|:.:|.:|...|...| |..:.||.....||..:|..|.
 Worm   202 AKDIESFIILRFFTGLAFPALFQIPFIICMEFMGNSGRIFSG-LMTSLFFGAAMALLGVVAMFIR 265

  Fly   252 NWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGK--IISEEVWSEMR 314
            .||........|..|.|:.....||||.|.:||||.....:.:|:.||.|||  :..:|:...|:
 Worm   266 RWRQLTFFCNAPFAFYIIYYFFLPESPRWSVSVGKWADAKKQLKKIAKMNGKSNVDVDELVDSMK 330

  Fly   315 ECYELKFANEQLGKQYTSLDLFKTFPRLVVLTILIVT--WMTVALAYDAHVRVVEILDTDIFITF 377
            . ::.....::..:.:...||||| |.|...| ||||  |:..|:.|:.....|..|..|.:.:|
 Worm   331 N-HQNAAEEKETKRSHNVTDLFKT-PNLRRKT-LIVTYIWVMNAIIYNGLTLNVSNLPVDDYWSF 392

  Fly   378 SLSSLVEIPAGIVPMLLLDRIGRKPMMSAVMLLC---AASSLFVGILKGH-WNASTAAIAARFFA 438
            .::..||:|...|...||...||:..::|.|::|   ..|::|:.  .|: |..::|:...:|..
 Worm   393 IINGAVELPGYFVVWPLLQCAGRRWTLAATMIVCGIGCVSAMFMP--DGYPWLVASASFIGKFGV 455

  Fly   439 TMAYNVGQQWASEILPTVLRGQGLAIINIMGQMGALLSPLVLSTHRYYRPLPMFIITLVSVIGAL 503
            ...:.|...:|.|:.|||:|..|:.:.:::...|.||:|.:::..:..:.||:.|:.|:::...:
 Worm   456 GSGFAVIYIFAGELYPTVVRAIGMGMSSMVAGSGLLLAPHIVNLGKIVKILPLLIMGLMALSAGI 520

  Fly   504 IILFLPETKGATMPQTLDEAE 524
            :..|||||.||.:|.|:::||
 Worm   521 LTFFLPETLGAPLPMTIEDAE 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 2A0119 17..519 CDD:273328 150/519 (29%)
MFS 141..509 CDD:119392 107/375 (29%)
oct-1NP_492617.4 2A0119 34..536 CDD:273328 150/519 (29%)
MFS 134..526 CDD:119392 114/398 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

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