DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG5592 and Slc22a13

DIOPT Version :9

Sequence 1:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster
Sequence 2:NP_598741.2 Gene:Slc22a13 / 102570 MGIID:2143107 Length:551 Species:Mus musculus


Alignment Length:529 Identity:158/529 - (29%)
Similarity:264/529 - (49%) Gaps:42/529 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 IGDFGPFQKRLLFWMMPAAFLFAFTYFGQIFMILLPKNHWCRVRELE----GLPESEQKNRGIPK 76
            :||||.||.||...|....||.||..|||:||: |.:.|.|.|..::    .|..:||....||.
Mouse    11 VGDFGRFQVRLTILMGIPNFLAAFFIFGQVFMV-LDEAHHCSVSWVKNHTFNLSAAEQLAISIPN 74

  Fly    77 KQDGSFENCFMYNVPYDSNATNDA-----NQTRSPIPCNNGWIYDRKEVPYESIATEYNWVCDKR 136
            ...|..|:|.|:..|.||.:..|.     |:|::   |::||.|.....  :|:..|::.|||::
Mouse    75 DTAGRPESCLMFRPPPDSASLEDILSHRFNETQA---CDSGWDYPENRP--QSLKKEFDLVCDRK 134

  Fly   137 DFGTYSVVVYFVGCIVGCLCFGFITDHSGRLPALFLANSCSMIGGCVSVVCKDFPCFAASRFV-- 199
            :....|..|:..|.:||.|.||.:.|..||.|:|.:....|.|....:.....|..:.|.|||  
Mouse   135 NLKKTSQSVFMAGLLVGALVFGPVCDWIGRRPSLLMQVLLSGITSMATAFVSSFELYLALRFVLA 199

  Fly   200 ---AG--LSMNYCFVPIYILTLENVGIKYRTLVGNLALTFFFTLGACLLPWLAYVISNWRHYAMV 259
               ||  ||.|       :|..|.||..:||....||.: ...||..:|..|||.:.|||...:.
Mouse   200 TANAGFLLSTN-------VLISEWVGPSWRTQAVVLAQS-NVALGQMVLAGLAYGVRNWRLLQIT 256

  Fly   260 VALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAAKANGKIISEEVWSEMRECYELKFANE 324
            ...|::.:.....:.||||.||:|.|:.:...:::::||..||:.:|.|:.:::        ..|
Mouse   257 GTAPVLLLFFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLSPELLNQL--------VPE 313

  Fly   325 QLGKQYTSLDLFKTFPRLVVLT-ILIVTWMTVALAYDAHVRVVEILDTDIFITFSLSSLVEIPAG 388
            :.|....:||||: .|.|..:| |||..|...:|.|.:....|.....||::|..:...||:|..
Mouse   314 KTGPSGNALDLFR-HPHLRKVTLILIAVWFVDSLVYYSLSFQVGDFGLDIYVTQLIFGAVEMPGR 377

  Fly   389 IVPMLLLDRIGRKPMMSAVMLLCAASSLFVGILKGHWN--ASTAAIAARFFATMAYNVGQQWASE 451
            .:.:|:::::|||......:.|.....:.:..:.|...  .:..|:..:|.:..|:.:...:.:|
Mouse   378 FLSVLMMEKLGRKWSQLCTLTLAGIMYIIIIFIPGDLPTVVTVLAVVGKFASAAAFTISYVYTAE 442

  Fly   452 ILPTVLRGQGLAIINIMGQMGALLSPLVLSTHRYYRPLPMFIITLVSVIGALIILFLPETKGATM 516
            :.||::|..|:.:::|..::|.:::|||:...:|::.:||.|...:.:...|:...||||:|.|:
Mouse   443 LFPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHQAIPMVIFGSLPIGAGLLCALLPETRGQTL 507

  Fly   517 PQTLDEAEK 525
            ..||.:.|:
Mouse   508 KDTLQDLEQ 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5592NP_647996.1 2A0119 17..519 CDD:273328 155/520 (30%)
MFS 141..509 CDD:119392 103/377 (27%)
Slc22a13NP_598741.2 2A0119 12..510 CDD:273328 155/520 (30%)
MFS 139..500 CDD:119392 103/377 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843781
Domainoid 1 1.000 69 1.000 Domainoid score I9569
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.